Les mutants précore et du promoteur basal du core du virus de l’hépatite B

Le virus de l’hépatite B (VHB) est le seul virus à ADN qui possède une étape de reverse transcription au cours de son cycle de réplication. L’absence d’activité 3’-5’ exonucléasique de la fonction reversetranscriptase de l’ADN polymérase du virus génère une accumulation de mutations sur l’ensemble du génome viral. Ainsi, chez un même individu vont coexister des populations virales sauvages et mutées qui pourront évoluer tout au long de l’histoire naturelle de l’infection. La variabilité génétique du VHB s’observe dans toutes les régions du génome viral. La mutation la plus fréquemment décrite dans la région précore (PC) du VHB est la mutation G1896A qui induit la formation d’un codon stop dans l’ARN précore et abolit la synthèse de l’antigène HBe. Dans la région du promoteur basal du core (PBC), la double mutation (A1762T-G1764A) est associée à une baisse de la synthèse de l’antigène HBe. L’impact des mutants PC et du PBC dans l’histoire naturelle de l’hépatite B et dans la sévérité des lésions hépatiques n’est pas clairement établi

Weakening of fuzzy relational queries: an absolute proximity relation-based approach

In this paper we address the problem of query failure in the context of flexible querying. We propose a fuzzy set–based approach for relaxing queries involving gradual predicates. This approach relies on the notion of proximity relation which is defined in an absolute way. We show how such proximity relation allows for transforming a given predicate into an enlarged one. The resulting predicate is semantically not far from the original one and it is obtained by a simple fuzzy arithmetic operation. The main features of the weakening mechanism are investigated and a comparative study with some methods proposed for the purpose of fuzzy query weakening is presented as well. Last, an example is provided to illustrate our proposal in the case of conjunctive queries.Peer Reviewe

Quantification de l’antigène HBs : intérêts et limites dans le suivi des patients infectés par le virus de l’hépatite B

Hepatitis B surface antigen (HBsAg) is usually used as a qualitative marker for the diagnosis of hepatitis B virus (HBV) infection, ant its persistence for more 6 months defines chronic hepatitis B (CHB) infection. HBsAg quantification was introduced several years ago. Commercial quantitative assays are now available and studies have suggested its interest for the monitoring patients with chronic hepatitis B. Indeed, HBsAg titers can correlate with intrahepatic cccDNA levels. Several studies have shown that HBsAg titers vary in the different phases of the natural history of the CHB infection. The kinetic of serum HBsAg seems to have a predictive value of HBsAg clearance after treatment or of reactivation, in the case of lack of response to treatment. However, interpretation has to take into account the phase of CHB infection, the HBV genotype, HBeAg status and serum HBV DNA

Routing Optimisation for Towing a Floating Offshore Wind Turbine under Weather Constraints

This paper presents a methodology for optimising routing for towing of fully assembled Floating Offshore Wind Turbines using a purpose-built ship simulator to generate datasets describing dynamics for a towing arrangement together with the engine data of the ship, and using such dataset and historical metocean data to perform multi-objective route optimisation for the tow using NSGA-II evolutionary algorithm. The work introduces the new ship simulator and the modelling of the platform VolturnUS-S, including the discussion of a comparative experiment between the model in the ship simulator and a 1:70 scale model in a wave tank. This is then followed by a presentation of the towing experiments, the characteristics of the data obtained from them, and the methodology for the optimisation of the towing routes with the following minimisation objectives: the duration of the tow, the maximum tension in the towing line, and the carbon emissions. Results are presented and discussed together with the limitations. The methodology has the potential to offer rapid and accurate results, providing a framework for safe, fast, and economical experimental process that could enhance visibility for operations before high maturity level is achieved or they can be physically performed, and contribute to improve marine operations

Correlation between the promoter basal core and precore mutations and HBsAg quantification in French blood donors infected with hepatitis B virus

International audienceHepatitis B virus (HBV) basal core promoter (BCP) and precore (PC) mutations, HBV viral load and HBV surface antigen (HBsAg) quantitation were screened to assess correlations between these HBV markers in asymptomatic chronic hepatitis B carriers in France. From January 2006 to July 2007, 200 sera were collected from patients who were discovered to be HBsAg-positive when they volunteered to give blood. Direct sequencing of precore/core gene was used to detect A1762T/G1764A mutations in the BCP and G1896A in the PC region. HBV viral load and HBsAg were quantified with two commercials assays. The prevalence of the BCP and PC mixed/mutants were 37% and 60% respectively (P = 0.0001). HBV DNA level and HBsAg titer were significantly lower in subjects harboring the mixed/mutant PC virus compared to those infected by the wild phenotype. No significant difference was observed in HBV viral loads of blood donors infected by wild or mixed/mutant BCP viruses. Mutant or mixed PC virus was associated with male gender, HBeAb-positive status and HBV/D and HBV/E genotypes. BCP mutations were associated with age, and both HBV/A-HBV/E genotypes.The genetic properties of HBV in this cohort showed that most of the blood donors had a negative HBeAg serological status and harbored the PC mutant phenotype in combination with low levels of both HBV DNA and HBsAg. As the study was conducted in healthy subjects who could be considered as asmptomatic carriers, these results suggest a possible protective effect of the G1896A mutation against severe liver lesions. J. Med. Virol. 87:529–535, 2015. © 2014 Wiley Periodicals, Inc

Résultats de trois méthodes pour la détection de la mutation précore G1896A du virus de l’hépatite B chez les donneurs de sang français : PCR temps réel, séquençage et test Inno-LIPA

AIM: To screen hepatitis B virus (HBV) genotypes and associated basal core promoter (BCP; T1762A/A1764) and precore (PC; A1896) mutations among the 100 HBV surface antigen (HBsAg) positive voluntary blood donors in France. METHODS: HBV genotypes were determined by using direct sequence analysis. Three methods were used to detect G1896A mutation: non-commercial real-time PCR (PCRTR°, line probe assay (InnoLiPA HBV PreCore, INNOGENETICS(®)) and direct sequencing of precore gene. HBV viral load was quantified with two commercial real-time PCR (COBAS(®) AmpliPrep/COBAS(®) TaqMan(®) HBV Test/Roche and Real Time HBV/M2000/Abbott). RESULTS: The mean age of donors was 30 (18-64). Patients were from Africa (42%), Europa (50%), and Asia (8%). HBV/D was the most predominant (37%) genotype followed by HBV/A (31%) and HBV/E (22%). PC and BCP mutants were found in 57% with Inno-LIPA HBV test and 59% with both PCRTR and sequencing methods. A significant difference in the viral load of blood donors with wild and PC mutants was observed with the Taqman Cobas real time PCR (3,19 Log(10) UI/ml versus 4,93 Log(10) UI/ml, p < 0.05). Precore phenotype determination was in agreement with the three PC mutation detection methods in 56% of cases. CONCLUSIONS: Non-Caucasian genotype E was present in the French blood donors. PC mutation was more common than BCP mutations in this study. As HBV infected blood donors were more often asymptomatic carriers, we could speculate that the G1896A mutation may favour the asymptomatic state, supporting previous observations

Comparative evaluation of two commercial rapid tests able to detect Hepatitis C Virus (HCV) antibody: Flavicheck HCV versus ImmunoComb® HCV II

Date du colloque&nbsp;: 01/2009</p

Quantification and typing of Herpes Simplex Virus (HSV) type 1 and 2 in cerebrospinal fluid by Taqman and Sybergreen real-time PCR assays for HSV encephalitis diagnosis

Date du colloque&nbsp;: 05/2009</p

Detection of the G1896A mutation in the pre-core domain of HBV genome using a new SYBR-Green real time PCR

Date du colloque&nbsp;: 01/2009</p

Modelling of micro-sources for security studies

International audienceThe interconnection of small, modular generation and storage technologies at the MV and LV distribution level have the potential to significantly impact power system performance. In this paper models of the main micro-generation sources are described. In particular, the models of Microturbines, Fuel Cells, Photovoltaic Systems and Wind Turbines, are described. In addition basic models of their power electronic interfaces are given. The integration of the above models in a steady state and dynamic simulation tool, which is developed in the framework of the EU funded MICROGRIDS project, will provide a simulation test platform, which will be necessary to define and evaluate the developed operational and control strategies