A functional variant in the Stearoyl-CoA desaturase gene promoter enhances fatty acid desaturation in pork

There is growing public concern about reducing saturated fat intake. Stearoyl-CoA desaturase (SCD) is the lipogenic enzyme responsible for the biosynthesis of oleic acid (18:1) by desaturating stearic acid (18:0). Here we describe a total of 18 mutations in the promoter and 3′ non-coding region of the pig SCD gene and provide evidence that allele T at AY487830:g.2228T>C in the promoter region enhances fat desaturation (the ratio 18:1/18:0 in muscle increases from 3.78 to 4.43 in opposite homozygotes) without affecting fat content (18:0+18:1, intramuscular fat content, and backfat thickness). No mutations that could affect the functionality of the protein were found in the coding region. First, we proved in a purebred Duroc line that the C-T-A haplotype of the 3 single nucleotide polymorphisms (SNPs) (g.2108C>T; g.2228T>C; g.2281A>G) of the promoter region was additively associated to enhanced 18:1/18:0 both in muscle and subcutaneous fat, but not in liver. We show that this association was consistent over a 10-year period of overlapping generations and, in line with these results, that the C-T-A haplotype displayed greater SCD mRNA expression in muscle. The effect of this haplotype was validated both internally, by comparing opposite homozygote siblings, and externally, by using experimental Duroc-based crossbreds. Second, the g.2281A>G and the g.2108C>T SNPs were excluded as causative mutations using new and previously published data, restricting the causality to g.2228T>C SNP, the last source of genetic variation within the haplotype. This mutation is positioned in the core sequence of several putative transcription factor binding sites, so that there are several plausible mechanisms by which allele T enhances 18:1/18:0 and, consequently, the proportion of monounsaturated to saturated fat.This research was supported by grants from the Spanish Ministry of Science and Innovation (AGL2009-09779 and AGL2012-33529). RRF is recipient of a PhD scholarship from the Spanish Ministry of Science and Innovation (BES-2010-034607). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of manuscript

Trends in adult body-mass index in 200 countries from 1975 to 2014: a pooled analysis of 1698 population-based measurement studies with 19.2 million participants

Background Underweight and severe and morbid obesity are associated with highly elevated risks of adverse health outcomes. We estimated trends in mean body-mass index (BMI), which characterises its population distribution, and in the prevalences of a complete set of BMI categories for adults in all countries. Methods We analysed, with use of a consistent protocol, population-based studies that had measured height and weight in adults aged 18 years and older. We applied a Bayesian hierarchical model to these data to estimate trends from 1975 to 2014 in mean BMI and in the prevalences of BMI categories (<18·5 kg/m2 [underweight], 18·5 kg/m2 to <20 kg/m2, 20 kg/m2 to <25 kg/m2, 25 kg/m2 to <30 kg/m2, 30 kg/m2 to <35 kg/m2, 35 kg/m2 to <40 kg/m2, ≥40 kg/m2 [morbid obesity]), by sex in 200 countries and territories, organised in 21 regions. We calculated the posterior probability of meeting the target of halting by 2025 the rise in obesity at its 2010 levels, if post-2000 trends continue. Findings We used 1698 population-based data sources, with more than 19·2 million adult participants (9·9 million men and 9·3 million women) in 186 of 200 countries for which estimates were made. Global age-standardised mean BMI increased from 21·7 kg/m2 (95% credible interval 21·3–22·1) in 1975 to 24·2 kg/m2 (24·0–24·4) in 2014 in men, and from 22·1 kg/m2 (21·7–22·5) in 1975 to 24·4 kg/m2 (24·2–24·6) in 2014 in women. Regional mean BMIs in 2014 for men ranged from 21·4 kg/m2 in central Africa and south Asia to 29·2 kg/m2 (28·6–29·8) in Polynesia and Micronesia; for women the range was from 21·8 kg/m2 (21·4–22·3) in south Asia to 32·2 kg/m2 (31·5–32·8) in Polynesia and Micronesia. Over these four decades, age-standardised global prevalence of underweight decreased from 13·8% (10·5–17·4) to 8·8% (7·4–10·3) in men and from 14·6% (11·6–17·9) to 9·7% (8·3–11·1) in women. South Asia had the highest prevalence of underweight in 2014, 23·4% (17·8–29·2) in men and 24·0% (18·9–29·3) in women. Age-standardised prevalence of obesity increased from 3·2% (2·4–4·1) in 1975 to 10·8% (9·7–12·0) in 2014 in men, and from 6·4% (5·1–7·8) to 14·9% (13·6–16·1) in women. 2·3% (2·0–2·7) of the world's men and 5·0% (4·4–5·6) of women were severely obese (ie, have BMI ≥35 kg/m2). Globally, prevalence of morbid obesity was 0·64% (0·46–0·86) in men and 1·6% (1·3–1·9) in women. Interpretation If post-2000 trends continue, the probability of meeting the global obesity target is virtually zero. Rather, if these trends continue, by 2025, global obesity prevalence will reach 18% in men and surpass 21% in women; severe obesity will surpass 6% in men and 9% in women. Nonetheless, underweight remains prevalent in the world's poorest regions, especially in south Asia

A Spline-based Partial Element Equivalent Circuit Method for Electrostatics

This contribution investigates the connection between Isogeometric Analysis (IgA) and the Partial Element Equivalent Circuit (PEEC) method for electrostatic problems. We demonstrate that using the spline-based geometry concepts from IgA allows for extracting circuit elements without an explicit meshing step. Moreover, the proposed IgA-PEEC method converges for complex geometries up to three times faster than the conventional PEEC approach and, in turn, it requires a significantly lower number of degrees of freedom to solve a problem with comparable accuracy. The resulting method is closely related to the isogeometric boundary element method. However, it uses lowest-order basis functions to allow for straightforward physical and circuit interpretations. The findings are validated by an analytical example with complex geometry, i.e., significant curvature, and by a realistic model of a surge arrester

Optimized waveform relaxation solution of RLCG transmission line type circuits

Abstract — Today, parallel processing is necessary for the solution of large systems of ordinary differential equations (ODEs) as they are obtained from large electronic circuits or from discretizing partial differential equations (PDEs). Using a fine mesh in the discretization of these problems also leads to large compute times and large storage requirements. The waveform relaxation (WR) technique, which is ideally suited for the use of multiple processors for problems with multiple time scales has been used to solve such problems on parallel processors for such large systems of ODEs. However, applying the so-called classical WR techniques to strongly coupled systems leads to non-uniform slow convergence over a window in time for which the equations are integrated. In this paper, we present a so-called optimized WR algorithm applied to transmission line circuit problems based on the longitudinal partitioning into segments. This greatly improves the convergence for strongly coupled RLCG transmission line (TL) type circuits. The method can be applied to other similar circuits. The method is based on optimal parameters that lead to the optimal convergence of the iterations. Here, we present a practical optimized WR algorithm which is easy to use and is computationally inexpensive. I

A comparative study of two transient analysis algorithms flor lossy transmission lines with frequency-dependent data

Two general algorithms for the modeling of lossy transmission lines with frequency-dependent parameters are contrasted and compared. The first is based on the generalized method of characteristics while the second is based on a more recent Padé macromodeling approach. The different approximations made in these two algorithms are contrasted and computational evidence is presented to show that these two methods complement each other in their properties

Modeling and Analysis of Package PDN for Computing System Based on Cavity Model

Recent computing systems consume more than several hundred watts of power and a robust PDN design is critical to minimize power/ground (P/G) voltage fluctuation and get stable performance. In most cases, the IC package (PKG) PDN determines mid-frequency P/G noise characteristics. The PDN of our target IC package consists of more than ten thousands staggered microvias and tens of layers, representing a significant modeling challenge. Commercial tools can estimate the PKG PDN impedance via full-wave simulations, but it has several limitations at pre-layout stage. Whole simulation should be run for every small geometry changes and it takes much time. It can give circuit model seen at port, but does not provide physics-based circuit models corresponding to whole current path. In this paper we apply the cavity model, which has been previously largely used for PCB modeling, to a complex organic package structure. We here describe the assumptions used to get an equivalent circuit model for this type of geometry and the comparison of its loop inductances with commercial tools. The cavity model gives about 10 % error compared to commercial tool and the reason of error is analyzed. In addition, a study of the PKG decoupling capacitors location is performed with the goal of a minimal loop inductance. In the final paragraph, several unique features of the PKG PDN compared to PCB PDN modeling are described