Adherence to and Invasion of Human Intestinal Cells by Arcobacter Species and Their Virulence Genotypes

The genus Arcobacter is composed of 17 species which have been isolated from various sources. Of particular interest are A. butzleri, A. cryaerophilus, and A. skirrowii, as these have been associated with human cases of diarrhea, the probable transmissionrroutes being through the ingestion of contaminated drinking water and food. To date, only limited studies of virulence traits in this genus have been undertaken. The present study used 60 Arcobacter strains isolated from different sources, representing 16 of the 17 species of the genus, to investigate their ability to adhere to and invade the human intestinal cell line Caco-2. In addition, the presence of five putative virulence genes (ciaB, cadF, cj1349, hecA, and irgA) was screened for in these strains by PCR. All Arcobacter species except A. bivalviorum and Arcobacter sp. strain W63 adhered to Caco-2 cells, and most species (10/16) were invasive. The most invasive species were A. skirrowii, A. cryaerophilus, A. butzleri, and A. defluvii. All invasive strains were positive for ciaB (encoding a putative invasion protein). Other putative virulence genes were present in other species, i.e., A. butzleri (cadF, cj1349, irgA, and hecA), A. trophiarum (cj1349), A. ellisii (cj1349), and A. defluvii (irgA). No virulence genes were detected in strains which showed little or no invasion of Caco-2 cells. These results indicate that many Arcobacter species are potential pathogens of humans and animals

Genomic dissection of the 1994 Cronobacter sakazakii outbreak in a French neonatal intensive care unit

Background: Cronobacter sakazakii is a member of the genus Cronobacter that has frequently been isolated from powdered infant formula (PIF) and linked with rare but fatal neonatal infections such as meningitis and necrotising enterocolitis. The Cronobacter MLST scheme has reported over 400 sequence types and 42 clonal complexes; however C. sakazakii clonal complex 4 (CC4) has been linked strongly with neonatal infections, especially meningitis. There have been a number of reported Cronobacter outbreaks over the last three decades. The largest outbreak of C. sakazakii was in a neonatal intensive care unit (NICU) in France (1994) that lasted over 3 months and claimed the lives of three neonates. The present study used whole genome sequencing data of 26 isolates obtained from this outbreak to reveal their relatedness. This study is first of its kind to use whole genome sequencing data to analyse a Cronobacter outbreak. Methods: Whole genome sequencing data was generated for 26 C. sakazakii isolates on the Illumina MiSeq platform. The whole genome phylogeny was determined using Mugsy and RaxML. SNP calls were determined using SMALT and SAMtools, and filtered using VCFtools. Results: The whole genome phylogeny suggested 3 distant clusters of C. sakazakii isolates were associated with the outbreak. SNP typing and phylogeny indicate the source of the C. sakazakii could have been from extrinsic contamination of reconstituted infant formula from the NICU environment and personnel. This pool of strains would have contributed to the prolonged duration of the outbreak, which was up to 3 months. Furthermore 3 neonates were co-infected with C. sakazakii from two different genotype clusters. Conclusion: The genomic investigation revealed the outbreak consisted of an heterogeneous population of C. sakazakii isolates. The source of the outbreak was not identified, but probably was due to environmental and personnel reservoirs resulting in extrinsic contamination of the neonatal feeds. It also indicated that C. sakazakii isolates from different genotype clusters have the ability to co-infect neonates

A 94/183 GHz multichannel radiometer for Convair flights

A multichannel 94/183 GHz radiometer was designed, built, and installed on the NASA Convair 990 research aircraft to take data for hurricane penetration flights, SEASAT-A underflights for measuring rain and water vapor, and Nimbus-G underflights for new sea ice signatures and sea surface temperature data (94 GHz only). The radiometer utilized IF frequencies of 1, 5, and 8.75 GHz about the peak of the atmospheric water vapor absorption line, centered at 183.3 GHz, to gather data needed to determine the shape of the water molecule line. Another portion of the radiometer operated at 94 GHz and obtained data on the sea brightness temperature, sea ice signatures, and on areas of rain near the ocean surface. The radiometer used a multiple lens antenna/temperature calibration technique using 3 lenses and corrugated feed horns at 94 GHz and 183 GHz. Alignment of the feed beams at 94 GHz and 183 GHz was accomplished using a 45 deg oriented reflecting surface which permitted simultaneous viewing of the feeds on alternate cycles of the chopping intervals

Draft genome sequence of "Candidatus Cronobacter colletis" NCTC 14934T, a new species in the genus Cronobacter

Members of the Cronobacter genus are associated with serious infections in neonates. This is the first report of the draft genome sequence for the newly proposed species Cronobacter colletis

Draft genome sequences of three newly identified species in the genus Cronobacter, C. helveticus LMG23732T, C. pulveris LMG24059, and C. zurichensis LMG23730T

Cronobacter helveticus, Cronobacter pulveris, and Cronobacter zurichensis are newly described species in the Cronobacter genus, which is associated with serious infections of neonates. This is the first report of draft genome sequences for these species

Draft genome sequence of the earliest Cronobacter sakazakii sequence type 4 strain, NCIMB 8272

The Cronobacter sakazakii clonal lineage defined as sequence type 4 (ST4) is associated with severe cases of neonatal meningitis and persistence in powdered infant formula. For genome sequencing of the earliest deposited culture collection strain of Cronobacter sakazakii ST4, we used the strain NCIMB 8272, originally isolated from milk powder in 1950

Building Information Modelling in Tertiary Construction Project Management Education: A Programme-wide Implementation Strategy

This paper reports on the on-going development of teaching and learning supported by Building Information Modelling (BIM) in the undergraduate Construction Project Management Programme at the University of Technology Sydney. BIM is a model-driven approach to designing, constructing, operating and maintaining buildings and civil engineering facilities. The model that forms the core of the BIM approach is a smart, shared and computable three-dimensional model of the building or the civil engineering facility. At its heart, BIM and Virtual Construction Models (VCMs) are used to facilitate a more integrated and visual mode of teaching. The approach provides a new basis for developing problem based learning - one that has the potential to allow students to aggregate their learning around a central project whilst enabling problems to be scaled at different levels of complexity. This approach aims to better integrate and link individual subjects together as well as improve the development of core student attributes such as communication, understanding, decision making, collaboration and information gathering skills; very much mimicking the on-going technology driven transformation happening in industry. The VCMs aim to be regularly used in various formats as students progress through their undergraduate degree programme - and we adopt the term `vertical problems' to capture the way models and problem based learning are being utilised, where staff author `sub-plots' that utilise information models in a way that best suits their specific subjects, e.g. cost, time, quality, sustainability subject areas. To this end, the article reports on findings from the research, development and early implementation stages of a programme-wide teaching and learning proposition supported by BIM. This includes a typology that helps target varying degrees of model utilisation and diffusion in given subjects and transitional requirements for both staff and students

Draft genome sequence of a meningitic isolate of Cronobacter sakazakii clonal complex 4, strain 8399

The Cronobacter sakazakii clonal lineage defined as clonal complex 4 (CC4), composed of nine sequence types, is associated with severe cases of neonatal meningitis. To date, only closely related C. sakazakii sequence type 4 (ST4) strains have been sequenced. C. sakazakii strain 8399, isolated from a case of neonatal meningitis, was sequenced as the first non-ST4 C. sakazakii strain