Calcium binding activity of the epidermal growth factor-like domains of the apicomplexan microneme protein EtMIC4

Microneme proteins are secreted from apicomplexan parasites during invasion of host cells and they play crucial roles in parasite-host cell adhesion. EtMIC4 is a 240 kDa transmembrane protein from Eimeria tenella that contains 31 tandemly arranged epidermal growth factor (EGF), like repeats within its extracellular domain. The majority of these repeats have calcium binding (cb) consensus sequences. Little is known about cbEGFs in apicomplexan parasites but their presence in microneme proteins suggests that they may contribute to parasite-host interactions. To investigate the potential role of cbEGFs we have expressed and correctly refolded a cbEGF triplet from EtMIC4 (cbEGF7-9) and demonstrated that this triplet binds calcium. Circular dichroism spectroscopic analysis of cbEGF7-9 demonstrates that the molecule undergoes a gradual change in conformation with increasing levels of calcium. In the presence of calcium, the triplet becomes resistant to proteolytic degradation by a variety of proteases, a characteristic feature of cbEGF repeats from higher eukaryotic proteins, such as fibrillin, suggesting that calcium binding induces the formation of a rigid conformation. Moreover, mass spectrometric mapping of the cleavage sites that are protected by calcium shows that these sites are located both close to and distant from the calcium binding sites, indicating that protection is not due to steric hindrance by calcium ions, but rather due to the overall conformation adopted by the triplet in the presence of calcium. Thus, the tandemly-arranged cbEGF repeats within EtMIC4 provide a mechanism whereby, in the calcium-rich extracellular environment, the molecule could adopt a protease-resistant, rigid structure that could favour its interaction with host cell ligands

Attaining subclassical metrology in lossy systems with entangled coherent states

Quantum mechanics allows entanglement enhanced measurements to be performed, but loss remains an obstacle in constructing realistic quantum metrology schemes. However, recent work has revealed that entangled coherent states (ECSs) have the potential to perform robust subclassical measurements [J. Joo et al., Phys. Rev. Lett. 107, 083601 (2011)]. Up to now no read-out scheme has been devised that exploits this robust nature of ECSs, but we present here an experimentally accessible method of achieving precision close to the theoretical bound, even with loss.We show substantial improvements over unentangled classical states and highly entangled NOON states for a wide range of loss values, elevating quantum metrology to a realizable technology in the near future

Estimation of linkage disequilibrium in a sample of the United Kingdom dairy cattle population using unphased genotypes

The association between genetic marker alleles was estimated for two regions of the bovine genome from a random sample of 50 young dairy bulls born in the United Kingdom between 1988 and 1995. Microsatellite marker genotypes were obtained for six markers on chromosome 2 and seven markers on chromosome 6, spanning 38 and 20 cM, respectively. Two different methods, which do not require family information, were used to estimate population haplotype frequencies. Haplotype frequencies were estimated for pairs of loci using the expectation-maximization algorithm and for all linked loci using a Bayesian approach via a Markov chain-Monte Carlo algorithm. Significant (P = 0.0007) linkage disequilibrium was detected between pairs of loci in syntenic groups (that is, loci in the same linkage group), extending to about 10 cM. No significant linkage disequilibrium was detected between markers in nonsyntenic regions. Given the observed level of linkage disequilibrium, mapping methods based on population-wide association might provide a better resolution than traditional quantitative trait loci mapping methods in the U.K. dairy cattle population and may reduce the required sample sizes of the experiments

A taxonomic guide to the mysids of the South Atlantic Bight.

Following the examination of extensive collections from the National Museum of Natural History (NMNH), the Southeastern Regional Taxonomic Center (SERTC), and other regional institutions, 18 species of the family Mysidae are recognized and described from the South Atlantic Bight (Cape Lookout, North Carolina to Cape Canaveral, Florida). This report includes synonymies of previous records, as well as new species distribution records. Previous regional accounts of Metamysidopsis munda and Metamysidopsis mexicana are attributed to Metamysidopsis swifti. New regional records are established for Amathimysis brattegardi, Heteromysis beetoni, and Siriella thompsonii. Two other species tentatively identified as Amathimysis sp. (nr. serrata) and Mysidopsis sp. (cf. mortenseni) may represent new taxa. Neobathymysis renoculata is included and discussed as a potential regional species. An illustrated key to the species currently known from the South Atlantic Bight is presented. Relevant taxonomic, distributional, and ecological information is also included for each species. (PDF file contains 45 pages.

Effects of space shuttle launches STS-1 through STS-9 on terrestrial vegetation of John F. Kennedy Space Center, Florida

Space Shuttle launches produce a cloud containing hydrochloric acid (HCl), aluminum oxide (Al203), and other substances. Acidities of less than 0.5 pH have been measured routinely in association with the launch cloud. In an area of about 22 ha regularly exposed to the exhaust cloud during most Shuttle launches, acute vegetation damage has resulted from the first nine Shuttle launches. Changes include loss of sensitive species, loss of plant community structure, reduction in total cover, and replacement of some species by weedy invaders. Community level changes define a retrogressive sequence. One-time impacts to strand and dune vegetation occurred after launches of STS-8 and STS-9. Acute vegetation damage occurred especially to sensitive species. Within six months, however, recovery was nearly complete. Sensitivity of species to the launch cloud was partially predicted by previous laboratory studies. Far-field acidic and dry fallout from the cloud as it rises to stabilization and moves with the prevailing winds causes vegetation spotting. Damage from this deposition is minor; typically at most 1% to 5% of leaf surface area is affected. No plant mortality or community changes have occurred from far-field deposition

Effect of multimode entanglement on lossy optical quantum metrology

In optical interferometry multimode entanglement is often assumed to be the driving force behind quantum enhanced measurements. Recent work has shown this assumption to be false: single-mode quantum states perform just as well as their multimode entangled counterparts. We go beyond this to show that when photon losses occur, an inevitability in any realistic system, multimode entanglement is actually detrimental to obtaining quantum enhanced measurements. We specifically apply this idea to a superposition of coherent states, demonstrating that these states show a robustness to loss that allows them to significantly outperform their competitors in realistic systems. A practically viable measurement scheme is then presented that allows measurements close to the theoretical bound, even with loss. These results promote an alternate way of approaching optical quantum metrology using single-mode states that we expect to have great implications for the future

The Roots, Practices and Consequences of Terrorism: A Literature Review of Research in the Arts & Humanities

This report contains a literature review of Arts and Humanities research on the roots, practices and consequences of terrorism with an annotated bibliography. The literature review was carried out for the Home Office by a team at the University of Leeds between March and October 2006

NASA newsletters for the Weber Student Shuttle Involvement Project

Biweekly reports generated for the Weber Student Shuttle Involvement Project (SSIP) are discussed. The reports document the evolution of science, hardware, and logistics for this Shuttle project aboard the eleventh flight of the Space Transportation System (STS-41B), launched from Kennedy Space Center on February 3, 1984, and returned to KSC 8 days later. The reports were intended to keep all members of the team aware of progress in the project and to avoid redundancy and misunderstanding. Since the Weber SSIP was NASA's first orbital rat project, documentation of all actions was essential to assure the success of this complex project. Eleven reports were generated: October 3, 17 and 31; November 14 and 28; and December 12 and 17, 1983; and January 3, 16, and 23; and May 1, 1984. A subject index of the reports is included. The final report of the project is included as an appendix

Possible male infanticide in wild orangutans and a re-evaluation of infanticide risk

Infanticide as a male reproductive tactic is widespread across mammals, and is particularly prevalent in catarrhine primates. While it has never been observed in wild orangutans, infanticide by non-sire males has been predicted to occur due to their extremely long inter-birth intervals, semi-solitary social structure, and the presence of female counter-tactics to infanticide. Here, we report on the disappearance of a healthy four-month-old infant, along with a serious foot injury suffered by the primiparous mother. No other cases of infant mortality have been observed at this site in 30 years of study. Using photographic measurements of the injury, and information on the behavior and bite size of potential predators, we evaluate the possible causes of this injury. The context, including the behavior of the female and the presence of a new male at the time of the injury, lead us to conclude that the most likely cause of the infant loss and maternal injury was male infanticide. We suggest that in orangutans, and other species where nulliparous females are not preferred mates, these females may be less successful at using paternity confusion as an infanticide avoidance tactic, thus increasing the likelihood of infanticide of their first-born infants.Published versio

Response of selected plant and insect species to simulated solid rocket exhaust mixtures and to exhaust components from solid rocket fuels

The effects of solid rocket fuel (SRF) exhaust on selected plant and and insect species in the Merritt Island, Florida area was investigated in order to determine if the exhaust clouds generated by shuttle launches would adversely affect the native, plants of the Merritt Island Wildlife Refuge, the citrus production, or the beekeeping industry of the island. Conditions were simulated in greenhouse exposure chambers and field chambers constructed to model the ideal continuous stirred tank reactor. A plant exposure system was developed for dispensing and monitoring the two major chemicals in SRF exhaust, HCl and Al203, and for dispensing and monitoring SRF exhaust (controlled fuel burns). Plants native to Merritt Island, Florida were grown and used as test species. Dose-response relationships were determined for short term exposure of selected plant species to HCl, Al203, and mixtures of the two to SRF exhaust