Pathotypic diversity of Rhynchosporium secalis (Oudem) in Tunisia

Scald, caused by Rhynchosporium secalis (Oudem), is an important disease of barley in Tunisia particularly in northern, northwestern and central parts of the country where the climate is usually cold and wet during most of the barley growing season. Pathogenic variability of the barley scald pathogen in Tunisia was determined by testing the pathogenicity of 100 isolates from 5 different regions on 19 host differentials. Pathotypic diversity was high, with 93 R. secalis pathotypes identified on two differential sets (one comprising 9 and the other 10 barley lines) containing known resistance genes. A few pathotypes comprised 2% of the isolates; however, the majorities were represented by a single isolate. None of the differential lines was resistant to all isolates. The differential cultivar “Astrix” was the least compatible with the scald pathotypes followed by the differential cultivars “Atlas” and “Abyssinia”. Compatibility of the pathotypes on “Rihane” (69%) was close to that on “Osiris” (73%) and “La Mesita” (61%). None of the pathotypes was found in all the five regions of Tunisia surveyed. Some pathotypes were specific to a single region while others were found in several regions. The incidence of pathotypes varied considerably among regions, with region 3 (northwestern Tunisia) comprising the largest number of pathotypes. Virulent pathotypes were recovered in all regions but more pathotypic variability (44%) was observed in the semi-arid region 3. Differential cultivars allowed classification of R. secalis in four virulence groups. Canonical discriminant analysis showed no apparent association between virulence and geographical origin of the populations. Pathogenic variability in R. secalis in Tunisia was found not to be associated with geographical region, hence, the necessity for deployment of different resistance sources in major barley growing areas.Key words: Rhynchosporium secalis, barley, virulence groups, pathotypic variation

Phytoremediation potential of native plants: Biomonitoring approach in contaminated soils

Phytoremediation has been used to remediate contaminated site. This study aims to investigate the potential of the selected native plants to accumulate and tolerate chemical pollutants. Two sites were selected in Southern Tunisia lands (Gabès), i) Gannouch located near the chemical industrial complex and ii) Zerkineis around 35 kilometres far from the industrial activities. Soil and plants were sampled and analysed for cadmium (Cd), lead (Pb), copper (Cu), zinc (Zn) and fluorine (F) concentrations. The native plants were Bassia indica and Chenopodium album, with no obvious morphological toxic symptoms. Results indicated that the upper soil layers were alkaline and salt affected with low organic matter content. The highest levels of fluoride and heavy metal were found in Ghannouch. The contents of Cd, Cu, Pb, Zn and F in the roots, stem and leaves of the native plants exceed the normal ranges and the phytotoxic level. Bioconcentration factor (BCF), translocation factor (TF), and biological accumulation factor (BAF) were determined for each element. Based on these factors the selected plants were classified as excluders, indicators, and accumulators for each element. The native plants, studied herein, seems to have significant potential for phytoremediation, thus they may be used as biomonitors in contaminated soils. Bassia indica identified as Cd, Cu and Pb accumulator, could be an excellent candidate for phytoextraction and phyto stabilization because of its F excluder performance

Pathogen Populations Evolve to Greater Race Complexity in Agricultural Systems – Evidence from Analysis of Rhynchosporium secalis Virulence Data

Fitness cost associated with pathogens carrying unnecessary virulence alleles is the fundamental assumption for preventing the emergence of complex races in plant pathogen populations but this hypothesis has rarely been tested empirically on a temporal and spatial scale which is sufficient to distinguish evolutionary signals from experimental error. We analyzed virulence characteristics of ∼1000 isolates of the barley pathogen Rhynchosporium secalis collected from different parts of the United Kingdom between 1984 and 2005. We found a gradual increase in race complexity over time with a significant correlation between sampling date and race complexity of the pathogen (r20 = 0.71, p = 0.0002) and an average loss of 0.1 avirulence alleles (corresponding to an average gain of 0.1 virulence alleles) each year. We also found a positive and significant correlation between barley cultivar diversity and R. secalis virulence variation. The conditions assumed to favour complex races were not present in the United Kingdom and we hypothesize that the increase in race complexity is attributable to the combination of natural selection and genetic drift. Host resistance selects for corresponding virulence alleles to fixation or dominant frequency. Because of the weak fitness penalty of carrying the unnecessary virulence alleles, genetic drift associated with other evolutionary forces such as hitch-hiking maintains the frequency of the dominant virulence alleles even after the corresponding resistance factors cease to be used

Physicochemical properties of bacterial cellulose obtained from different Kombucha fermentation conditions

The production of bacterial cellulose has been limited due to its high cost and low productivity. Alternative low‐cost sources of this biopolymer of high purity and biocompatibility are needed in order to benefit from its enormous potential. Kombucha tea is a trend functional beverage whose production is growing exponentially worldwide, and the bacteria present in this fermented beverage belonging to the genus Komagataeibacter are capable of producing a crystalline biofilm with interesting properties. Obtaining bacterial cellulose from Kombucha tea has already been studied, however several fermentation conditions are being optimized in order to scale‐up its production. In this study, we characterized the bacterial cellulose produced from three different Kombucha fermentation conditions. The scanning electron microscopy images revealed the crystalline structure of the biofilms. The energy‐dispersive x‐ray analysis exhibited the chemical composition of the crystals. The thermogravimetric analysis showed a rate of degradation between 490 and 560°C and the differential scanning calorimetry confirmed the presence of crystalline and amorphous regions in the bacterial cellulose samples. The results suggested that crystalline cellulose could be obtained by varying the fermentation conditions of Kombucha tea

Association of the PHACTR1/EDN1 genetic locus with spontaneous coronary artery dissection

Background: Spontaneous coronary artery dissection (SCAD) is an increasingly recognized cause of acute coronary syndromes (ACS) afflicting predominantly younger to middle-aged women. Observational studies have reported a high prevalence of extracoronary vascular anomalies, especially fibromuscular dysplasia (FMD) and a low prevalence of coincidental cases of atherosclerosis. PHACTR1/EDN1 is a genetic risk locus for several vascular diseases, including FMD and coronary artery disease, with the putative causal noncoding variant at the rs9349379 locus acting as a potential enhancer for the endothelin-1 (EDN1) gene. Objectives: This study sought to test the association between the rs9349379 genotype and SCAD. Methods: Results from case control studies from France, United Kingdom, United States, and Australia were analyzed to test the association with SCAD risk, including age at first event, pregnancy-associated SCAD (P-SCAD), and recurrent SCAD. Results: The previously reported risk allele for FMD (rs9349379-A) was associated with a higher risk of SCAD in all studies. In a meta-analysis of 1,055 SCAD patients and 7,190 controls, the odds ratio (OR) was 1.67 (95% confidence interval [CI]: 1.50 to 1.86) per copy of rs9349379-A. In a subset of 491 SCAD patients, the OR estimate was found to be higher for the association with SCAD in patients without FMD (OR: 1.89; 95% CI: 1.53 to 2.33) than in SCAD cases with FMD (OR: 1.60; 95% CI: 1.28 to 1.99). There was no effect of genotype on age at first event, P-SCAD, or recurrence. Conclusions: The first genetic risk factor for SCAD was identified in the largest study conducted to date for this condition. This genetic link may contribute to the clinical overlap between SCAD and FMD

Organic Computing at the System on Chip Level

Abstract—The evolution of CMOS technologies leads to integrated circuits with ever smaller device sizes, lower supply voltage, higher clock frequency and more process variability. Intermittent faults effecting logic and timing are becoming a major challenge for future integrated circuit designs. This paper presents an Organic Computing inspired SoC architecture which applies self-organization and self-calibration concepts to build reliable SoCs with lower overheads and a broader fault coverage than classical fault-tolerance techniques. We demonstrate the feasibility of this approach by example on the processing pipeline of a public-domain RISC CPU core. I

Lignin plasticization to improve binderless fiberboard mechanical properties

International audienceMechanical properties of binderless fiberboard are correlated to the hydrothermal history of the fibers during the board process. Water and temperature thickness gradients allow to calculate a gradient of T-Tg difference (Tg, local glass transition temperature, function of local water content; T, local temperature). This gradient explains the variation of mechanical properties within the thickness and in time. The in situ plasticization of lignin, which is supposed to increase the T-Tg difference, improves the macroscopic mechanical properties of fiberboards. POLYM. ENG. SCI., 45:809-816, 2005

Reducing quartz gangue entrainment in sulphide ore flotation by high molecular weight polyethylene oxide

Polyethylene oxide (PEO) was tested to flocculate and depress fine quartz particles in the batch flotation of artificial mixtures of chalcopyrite-quartz as well as a commercial Au-Cu sulphide ore sample. The aggregation/dispersion behaviors of quartz, chalcopyrite and their mixtures in the presence of PEO with and without potassium amyl xanthate (KAX) were studied by photometric dispersion analysis (PDA), scanning electron microscopy (SEM) and zeta potential measurements. Batch flotation results indicated that the addition of low dosages of PEO improved value mineral recovery and concentrate grade during the flotation of both the artificial mixtures of chalcopyrite-quartz and the Au-Cu sulphide ore sample. Aggregation/dispersion test results revealed that the PEO caused non-selective flocculation of quartz and chalcopyrite, forming large hetero-aggregates. However, the addition of KAX caused the chalcopyrite particles to break away from the hetero-aggregates, leading to separate homo-aggregates of quartz and chalcopyrite. The flotation of the fine chalcopyrite and the depression of the fine quartz were thus both improved

Full Length Research Paper - Pathotypic diversity of Rhynchosporium secalis (Oudem) in Tunisia

Scald, caused by Rhynchosporium secalis (Oudem), is an important disease of barley in Tunisia particularly in northern, northwestern and central parts of the country where the climate is usually cold and wet during most of the barley growing season. Pathogenic variability of the barley scald pathogen in Tunisia was determined by testing the pathogenicity of 100 isolates from 5 different regions on 19 host differentials. Pathotypic diversity was high, with 93 R. secalis pathotypes identified on two differential sets (one comprising 9 and the other 10 barley lines) containing known resistance genes. A few pathotypes comprised 2% of the isolates; however, the majorities were represented by a single isolate. None of the differential lines was resistant to all isolates. The differential cultivar "Astrix" was the least compatible with the scald pathotypes followed by the differential cultivars "Atlas" and "Abyssinia". Compatibility of the pathotypes on "Rihane" (69%) was close to that on "Osiris" (73%) and "La Mesita"(61%). None of the pathotypes was found in all the five regions of Tunisia surveyed. Some pathotypes were specific to a single region while others were found in several regions. The incidence of pathotypes varied considerably among regions, with region 3 (northwestern Tunisia) comprising the largest number of pathotypes. Virulent pathotypes were recovered in all regions but more pathotypic variability (44%) was observed in the semi-arid region 3. Differential cultivars allowed classification of R. secalis in four virulence groups. Canonical discriminant analysis showed no apparent association between virulence and geographical origin of the populations. Pathogenic variability in R. secalis in Tunisia was found not to be associated with geographical region, hence, the necessity for deployment of different resistance sources in major barley growing areas