Structural Data Recognition with Graph Model Boosting

This paper presents a novel method for structural data recognition using a large number of graph models. In general, prevalent methods for structural data recognition have two shortcomings: 1) Only a single model is used to capture structural variation. 2) Naive recognition methods are used, such as the nearest neighbor method. In this paper, we propose strengthening the recognition performance of these models as well as their ability to capture structural variation. The proposed method constructs a large number of graph models and trains decision trees using the models. This paper makes two main contributions. The first is a novel graph model that can quickly perform calculations, which allows us to construct several models in a feasible amount of time. The second contribution is a novel approach to structural data recognition: graph model boosting. Comprehensive structural variations can be captured with a large number of graph models constructed in a boosting framework, and a sophisticated classifier can be formed by aggregating the decision trees. Consequently, we can carry out structural data recognition with powerful recognition capability in the face of comprehensive structural variation. The experiments shows that the proposed method achieves impressive results and outperforms existing methods on datasets of IAM graph database repository.Comment: 8 page

Efficient Classification for Metric Data

Recent advances in large-margin classification of data residing in general metric spaces (rather than Hilbert spaces) enable classification under various natural metrics, such as string edit and earthmover distance. A general framework developed for this purpose by von Luxburg and Bousquet [JMLR, 2004] left open the questions of computational efficiency and of providing direct bounds on generalization error. We design a new algorithm for classification in general metric spaces, whose runtime and accuracy depend on the doubling dimension of the data points, and can thus achieve superior classification performance in many common scenarios. The algorithmic core of our approach is an approximate (rather than exact) solution to the classical problems of Lipschitz extension and of Nearest Neighbor Search. The algorithm's generalization performance is guaranteed via the fat-shattering dimension of Lipschitz classifiers, and we present experimental evidence of its superiority to some common kernel methods. As a by-product, we offer a new perspective on the nearest neighbor classifier, which yields significantly sharper risk asymptotics than the classic analysis of Cover and Hart [IEEE Trans. Info. Theory, 1967].Comment: This is the full version of an extended abstract that appeared in Proceedings of the 23rd COLT, 201

The Influence of Global Constraints on Similarity Measures for Time-Series Databases

A time series consists of a series of values or events obtained over repeated measurements in time. Analysis of time series represents and important tool in many application areas, such as stock market analysis, process and quality control, observation of natural phenomena, medical treatments, etc. A vital component in many types of time-series analysis is the choice of an appropriate distance/similarity measure. Numerous measures have been proposed to date, with the most successful ones based on dynamic programming. Being of quadratic time complexity, however, global constraints are often employed to limit the search space in the matrix during the dynamic programming procedure, in order to speed up computation. Furthermore, it has been reported that such constrained measures can also achieve better accuracy. In this paper, we investigate two representative time-series distance/similarity measures based on dynamic programming, Dynamic Time Warping (DTW) and Longest Common Subsequence (LCS), and the effects of global constraints on them. Through extensive experiments on a large number of time-series data sets, we demonstrate how global constrains can significantly reduce the computation time of DTW and LCS. We also show that, if the constraint parameter is tight enough (less than 10-15% of time-series length), the constrained measure becomes significantly different from its unconstrained counterpart, in the sense of producing qualitatively different 1-nearest neighbor graphs. This observation explains the potential for accuracy gains when using constrained measures, highlighting the need for careful tuning of constraint parameters in order to achieve a good trade-off between speed and accuracy

Tree Edit Distance Learning via Adaptive Symbol Embeddings

Metric learning has the aim to improve classification accuracy by learning a distance measure which brings data points from the same class closer together and pushes data points from different classes further apart. Recent research has demonstrated that metric learning approaches can also be applied to trees, such as molecular structures, abstract syntax trees of computer programs, or syntax trees of natural language, by learning the cost function of an edit distance, i.e. the costs of replacing, deleting, or inserting nodes in a tree. However, learning such costs directly may yield an edit distance which violates metric axioms, is challenging to interpret, and may not generalize well. In this contribution, we propose a novel metric learning approach for trees which we call embedding edit distance learning (BEDL) and which learns an edit distance indirectly by embedding the tree nodes as vectors, such that the Euclidean distance between those vectors supports class discrimination. We learn such embeddings by reducing the distance to prototypical trees from the same class and increasing the distance to prototypical trees from different classes. In our experiments, we show that BEDL improves upon the state-of-the-art in metric learning for trees on six benchmark data sets, ranging from computer science over biomedical data to a natural-language processing data set containing over 300,000 nodes.Comment: Paper at the International Conference of Machine Learning (2018), 2018-07-10 to 2018-07-15 in Stockholm, Swede

One-class classifiers based on entropic spanning graphs

One-class classifiers offer valuable tools to assess the presence of outliers in data. In this paper, we propose a design methodology for one-class classifiers based on entropic spanning graphs. Our approach takes into account the possibility to process also non-numeric data by means of an embedding procedure. The spanning graph is learned on the embedded input data and the outcoming partition of vertices defines the classifier. The final partition is derived by exploiting a criterion based on mutual information minimization. Here, we compute the mutual information by using a convenient formulation provided in terms of the $\alpha$-Jensen difference. Once training is completed, in order to associate a confidence level with the classifier decision, a graph-based fuzzy model is constructed. The fuzzification process is based only on topological information of the vertices of the entropic spanning graph. As such, the proposed one-class classifier is suitable also for data characterized by complex geometric structures. We provide experiments on well-known benchmarks containing both feature vectors and labeled graphs. In addition, we apply the method to the protein solubility recognition problem by considering several representations for the input samples. Experimental results demonstrate the effectiveness and versatility of the proposed method with respect to other state-of-the-art approaches.Comment: Extended and revised version of the paper "One-Class Classification Through Mutual Information Minimization" presented at the 2016 IEEE IJCNN, Vancouver, Canad