TRACTABLE DATA-FLOW ANALYSIS FOR DISTRIBUTED SYSTEMS

Automated behavior analysis is a valuable technique in the development and maintainence of distributed systems. In this paper, we present a tractable dataflow analysis technique for the detection of unreachable states and actions in distributed systems. The technique follows an approximate approach described by Reif and Smolka, but delivers a more accurate result in assessing unreachable states and actions. The higher accuracy is achieved by the use of two concepts: action dependency and history sets. Although the technique, does not exhaustively detect all possible errors, it detects nontrivial errors with a worst-case complexity quadratic to the system size. It can be automated and applied to systems with arbitrary loops and nondeterministic structures. The technique thus provides practical and tractable behavior analysis for preliminary designs of distributed systems. This makes it an ideal candidate for an interactive checker in software development tools. The technique is illustrated with case studies of a pump control system and an erroneous distributed program. Results from a prototype implementation are presented

BrainFrame: A node-level heterogeneous accelerator platform for neuron simulations

Objective: The advent of High-Performance Computing (HPC) in recent years has led to its increasing use in brain study through computational models. The scale and complexity of such models are constantly increasing, leading to challenging computational requirements. Even though modern HPC platforms can often deal with such challenges, the vast diversity of the modeling field does not permit for a single acceleration (or homogeneous) platform to effectively address the complete array of modeling requirements. Approach: In this paper we propose and build BrainFrame, a heterogeneous acceleration platform, incorporating three distinct acceleration technologies, a Dataflow Engine, a Xeon Phi and a GP-GPU. The PyNN framework is also integrated into the platform. As a challenging proof of concept, we analyze the performance of BrainFrame on different instances of a state-of-the-art neuron model, modeling the Inferior- Olivary Nucleus using a biophysically-meaningful, extended Hodgkin-Huxley representation. The model instances take into account not only the neuronal- network dimensions but also different network-connectivity circumstances that can drastically change application workload characteristics. Main results: The synthetic approach of three HPC technologies demonstrated that BrainFrame is better able to cope with the modeling diversity encountered. Our performance analysis shows clearly that the model directly affect performance and all three technologies are required to cope with all the model use cases.Comment: 16 pages, 18 figures, 5 table

Real-time support for high performance aircraft operation

The feasibility of real-time processing schemes using artificial neural networks (ANNs) is investigated. A rationale for digital neural nets is presented and a general processor architecture for control applications is illustrated. Research results on ANN structures for real-time applications are given. Research results on ANN algorithms for real-time control are also shown

Automatic translation of non-repetitive OpenMP to MPI

Cluster platforms with distributed-memory architectures are becoming increasingly available low-cost solutions for high performance computing. Delivering a productive programming environment that hides the complexity of clusters and allows writing efficient programs is urgently needed. Despite multiple efforts to provide shared memory abstraction, message-passing (MPI) is still the state-of-the-art programming model for distributed-memory architectures. ^ Writing efficient MPI programs is challenging. In contrast, OpenMP is a shared-memory programming model that is known for its programming productivity. Researchers introduced automatic source-to-source translation schemes from OpenMP to MPI so that programmers can use OpenMP while targeting clusters. Those schemes limited their focus on OpenMP programs with repetitive communication patterns (where the analysis of communication can be simplified). This dissertation reduces this limitation and presents a novel OpenMP-to-MPI translation scheme that covers OpenMP programs with both repetitive and non-repetitive communication patterns. We target laboratory-size clusters of ten to hundred nodes (commonly found in research laboratories and small enterprises). ^ With our translation scheme, six non-repetitive and four repetitive OpenMP benchmarks have been efficiently scaled to a cluster of 64 cores. By contrast, the state-of-the-art translator scaled only the four repetitive benchmarks. In addition, our translation scheme was shown to outperform or perform as well as the state-of-the-art translator. We also compare the translation scheme with available hand-coded MPI and Unified Parallel C (UPC) programs

Towards Analytics Aware Ontology Based Access to Static and Streaming Data (Extended Version)

Real-time analytics that requires integration and aggregation of heterogeneous and distributed streaming and static data is a typical task in many industrial scenarios such as diagnostics of turbines in Siemens. OBDA approach has a great potential to facilitate such tasks; however, it has a number of limitations in dealing with analytics that restrict its use in important industrial applications. Based on our experience with Siemens, we argue that in order to overcome those limitations OBDA should be extended and become analytics, source, and cost aware. In this work we propose such an extension. In particular, we propose an ontology, mapping, and query language for OBDA, where aggregate and other analytical functions are first class citizens. Moreover, we develop query optimisation techniques that allow to efficiently process analytical tasks over static and streaming data. We implement our approach in a system and evaluate our system with Siemens turbine data

Partitioning SKA Dataflows for Optimal Graph Execution

Optimizing data-intensive workflow execution is essential to many modern scientific projects such as the Square Kilometre Array (SKA), which will be the largest radio telescope in the world, collecting terabytes of data per second for the next few decades. At the core of the SKA Science Data Processor is the graph execution engine, scheduling tens of thousands of algorithmic components to ingest and transform millions of parallel data chunks in order to solve a series of large-scale inverse problems within the power budget. To tackle this challenge, we have developed the Data Activated Liu Graph Engine (DALiuGE) to manage data processing pipelines for several SKA pathfinder projects. In this paper, we discuss the DALiuGE graph scheduling sub-system. By extending previous studies on graph scheduling and partitioning, we lay the foundation on which we can develop polynomial time optimization methods that minimize both workflow execution time and resource footprint while satisfying resource constraints imposed by individual algorithms. We show preliminary results obtained from three radio astronomy data pipelines.Comment: Accepted in HPDC ScienceCloud 2018 Worksho

VegaProf: Profiling Vega Visualizations

Vega is a popular domain-specific language (DSL) for visualization specification. At runtime, Vega's DSL is first transformed into a dataflow graph and then functions to render visualization primitives. While the Vega abstraction of implementation details simplifies visualization creation, it also makes Vega visualizations challenging to debug and profile without adequate tools. Our formative interviews with three practitioners at Sigma Computing showed that existing developer tools are not suited for visualization profiling as they are disconnected from the semantics of the Vega DSL specification and its resulting dataflow graph. We introduce VegaProf, the first performance profiler for Vega visualizations. VegaProf effectively instruments the Vega library by associating the declarative specification with its compilation and execution. Using interactive visualizations, VegaProf enables visualization engineers to interactively profile visualization performance at three abstraction levels: function, dataflow graph, and visualization specification. Our evaluation through two use cases and feedback from five visualization engineers at Sigma Computing shows that VegaProf makes visualization profiling tractable and actionable.Comment: Submitted to EuroVis'2