Spurious, Emergent Laws in Number Worlds

We study some aspects of the emergence of logos from chaos on a basal model of the universe using methods and techniques from algorithmic information and Ramsey theories. Thereby an intrinsic and unusual mixture of meaningful and spurious, emerging laws surfaces. The spurious, emergent laws abound, they can be found almost everywhere. In accord with the ancient Greek theogony one could say that logos, the Gods and the laws of the universe, originate from "the void," or from chaos, a picture which supports the unresolvable/irreducible lawless hypothesis. The analysis presented in this paper suggests that the "laws" discovered in science correspond merely to syntactical correlations, are local and not universal.Comment: 24 pages, invited contribution to "Contemporary Natural Philosophy and Philosophies - Part 2" - Special Issue of the journal Philosophie

Volume-Enclosing Surface Extraction

In this paper we present a new method, which allows for the construction of triangular isosurfaces from three-dimensional data sets, such as 3D image data and/or numerical simulation data that are based on regularly shaped, cubic lattices. This novel volume-enclosing surface extraction technique, which has been named VESTA, can produce up to six different results due to the nature of the discretized 3D space under consideration. VESTA is neither template-based nor it is necessarily required to operate on 2x2x2 voxel cell neighborhoods only. The surface tiles are determined with a very fast and robust construction technique while potential ambiguities are detected and resolved. Here, we provide an in-depth comparison between VESTA and various versions of the well-known and very popular Marching Cubes algorithm for the very first time. In an application section, we demonstrate the extraction of VESTA isosurfaces for various data sets ranging from computer tomographic scan data to simulation data of relativistic hydrodynamic fireball expansions.Comment: 24 pages, 33 figures, 4 tables, final versio

Revisiting the Rice Theorem of Cellular Automata

A cellular automaton is a parallel synchronous computing model, which consists in a juxtaposition of finite automata whose state evolves according to that of their neighbors. It induces a dynamical system on the set of configurations, i.e. the infinite sequences of cell states. The limit set of the cellular automaton is the set of configurations which can be reached arbitrarily late in the evolution. In this paper, we prove that all properties of limit sets of cellular automata with binary-state cells are undecidable, except surjectivity. This is a refinement of the classical "Rice Theorem" that Kari proved on cellular automata with arbitrary state sets.Comment: 12 pages conference STACS'1

From algebra to logic: there and back again -- the story of a hierarchy

This is an extended survey of the results concerning a hierarchy of languages that is tightly connected with the quantifier alternation hierarchy within the two-variable fragment of first order logic of the linear order.Comment: Developments in Language Theory 2014, Ekaterinburg : Russian Federation (2014

Algorithmic Randomness as Foundation of Inductive Reasoning and Artificial Intelligence

This article is a brief personal account of the past, present, and future of algorithmic randomness, emphasizing its role in inductive inference and artificial intelligence. It is written for a general audience interested in science and philosophy. Intuitively, randomness is a lack of order or predictability. If randomness is the opposite of determinism, then algorithmic randomness is the opposite of computability. Besides many other things, these concepts have been used to quantify Ockham's razor, solve the induction problem, and define intelligence.Comment: 9 LaTeX page

Speeding-up Dynamic Programming with Representative Sets - An Experimental Evaluation of Algorithms for Steiner Tree on Tree Decompositions

Dynamic programming on tree decompositions is a frequently used approach to solve otherwise intractable problems on instances of small treewidth. In recent work by Bodlaender et al., it was shown that for many connectivity problems, there exist algorithms that use time, linear in the number of vertices, and single exponential in the width of the tree decomposition that is used. The central idea is that it suffices to compute representative sets, and these can be computed efficiently with help of Gaussian elimination. In this paper, we give an experimental evaluation of this technique for the Steiner Tree problem. A comparison of the classic dynamic programming algorithm and the improved dynamic programming algorithm that employs the table reduction shows that the new approach gives significant improvements on the running time of the algorithm and the size of the tables computed by the dynamic programming algorithm, and thus that the rank based approach from Bodlaender et al. does not only give significant theoretical improvements but also is a viable approach in a practical setting, and showcases the potential of exploiting the idea of representative sets for speeding up dynamic programming algorithms

Equilibrium Clusters in Concentrated Lysozyme Protein Solutions

We have studied the structure of salt-free lysozyme at 293 K and pH 7.8 using molecular simulations and experimental SAXS effective potentials between proteins at three volume fractions, 0.012, 0.033, and 0.12. We found that the structure of lysozyme near physiological conditions strongly depends on the volume fraction of proteins. The studied lysozyme solutions are dominated by monomers only for <0.012; for the strong dilution 70% of proteins are in a form of monomers. For 0.033 only 20% of proteins do not belong to a cluster. The clusters are mainly elongated. For 0.12 almost no individual particles exits, and branched, irregular clusters of large extent appear. Our simulation study provides new insight into the formation of equilibrium clusters in charged protein solutions near physiological conditions