Using Links to prototype a Database Wiki

Both relational databases and wikis have strengths that make them attractive for use in collaborative applications. In the last decade, database-backed Web applications have been used extensively to develop valuable shared biological references called curated databases. Databases offer many advantages such as scalability, query optimization and concurrency control, but are not easy to use and lack other features needed for collaboration. Wikis have become very popular for early-stage biocuration projects because they are easy to use, encourage sharing and collaboration, and provide built-in support for archiving, history-tracking and annotation. However, curation projects often outgrow the limited capabilities of wikis for structuring and efficiently querying data at scale, necessitating a painful phase transition to a database-backed Web application. We perceive a need for a new class of general-purpose system, which we call a Database Wiki, that combines flexible wiki-like support for collaboration with robust database-like capabilities for structuring and querying data. This paper presents DBWiki, a design prototype for such a system written in the Web programming language Links. We present the architecture, typical use, and wiki markup language design for DBWiki and discuss features of Links that provided unique advantages for rapid Web/database application prototyping

Improving Collaborative Drawing using HTML5

This research looks into improving online web-based collaborative drawing using HTML5. Although many systems have been developed over a number of years, none of the applications released have been satisfactory for many artists; the core drawing experience was too different from a stand-alone drawing applications. Stand-alone drawing applications have better freedom of control with functions like undo and allow artists to work efficiently with hotkeys. The advent of the HTML5 Canvas Element and Websockets in recent browsers has provided new opportunities for collaborative online interaction. This research used an incremental development approach to build a prototype HTML5 drawing application providing new functionality for online collaborative drawing. The project was supported by two experienced artists throughout investigation, design, implementation and testing. The project artists helped validate design decisions and evaluate the implementation. As a result, a robust HTML5 collaborative drawing application was built. The prototype contains core drawing functionality that existing applications did not. Features include: undo and redo, free canvas transformation, complex hotkey interaction, custom canvas size support, colour wheel, and layers. All these features work smoothly in a fully synchronized network environment under a client-server model. The collaboration system uses an authoritative server structure with local prediction and re-synchronization to hide latency. Although the result is only a prototype, the evaluations from the project artists were very positive. Once more functionality targeted towards social interaction is built, the prototype will be ready for mass public testing. Although there are some issues caused by the immaturity of HTML5 technology, this project affirms its capability for collaborative web applications

Model-based groupware solution for distributed real-time collaborative 4D planning via teamwork

Construction planning plays a fundamental role in construction project management that requires team working among planners from a diverse range of disciplines and in geographically dispersed working situations. Model-based four-dimensional (4D) computer-aided design (CAD) groupware, though considered a possible approach to supporting collaborative planning, is still short of effective collaborative mechanisms for teamwork due to methodological, technological and social challenges. Targeting this problem, this paper proposes a model-based groupware solution to enable a group of multidisciplinary planners to perform real-time collaborative 4D planning across the Internet. In the light of the interactive definition method, and its computer-supported collaborative work (CSCW) design analysis, the paper discusses the realization of interactive collaborative mechanisms from software architecture, application mode, and data exchange protocol. These mechanisms have been integrated into a groupware solution, which was validated by a planning team in a truly geographically dispersed condition. Analysis of the validation results revealed that the proposed solution is feasible for real-time collaborative 4D planning to gain a robust construction plan through collaborative teamwork. The realization of this solution triggers further considerations about its enhancement for wider groupware applications

Towards a generic platform for developing CSCL applications using Grid infrastructure

The goal of this paper is to explore the possibility of using CSCL component-based software under a Grid infrastructure. The merge of these technologies represents an attractive, but probably quite laborious enterprise if we consider not only the benefits but also the barriers that we have to overcome. This work presents an attempt toward this direction by developing a generic platform of CSCL components and discussing the advantages that we could obtain if we adapted it to the Grid. We then propose a means that could make this adjustment possible due to the high degree of genericity that our library component is endowed with by being based on the generic programming paradigm. Finally, an application of our library is proposed both for validating the adequacy of the platform which it is based on and for indicating the possibilities gained by using it under the Grid.Peer ReviewedPostprint (published version

A Generic Communications Module for Cooperative 3D Visualization and Modelling over the Internet: the Collaborative API

Cooperative three-dimensional visualization and modeling applications allow a distributed group of users to work together with a model they share. To implement this kind of applications the underlying communications system must provide reliable and ordered multicast of users interactions. Due to the high complexity that characterizes the models, network bandwidth requirements have limited their use to intranets or in a few cases to very high-speed Internet connections. In this paper we present a communications module that solves this problem. The library exposed, which is called Collaborative API, supports the creation of very efficient cooperative 3D visualization and modeling applications by optimizing the use of the network resources. The Collaborative API, implements a new communications architecture: the dynamic client/server. The communications module presented in this paper is illustrated by two examples of applications that use it to provide cooperative 3D visualization over the Internet

Robust collaborative services interactions under system crashes and network failures

Electronic collaboration has grown significantly in the last decade, with applications in many different areas such as shopping, trading, and logistics. Often electronic collaboration is based on automated business processes managed by different companies and connected through the Internet. Such a business process is normally deployed on a process engine, which is a piece of software that is able to execute the business process with the help of infrastructure services (operating system, database, network service, etc.). With the possibility of system crashes and network failures, the design of robust interactions for collaborative processes is a challenge. System crashes and network failures are common events, which may happen in various information systems, e.g., servers, desktops, mobile devices. Business processes use messages to synchronize their state. If a process changes its state, it sends a message to its peer processes in the collaboration to inform them about this change. System crashes and network failures may result in loss of messages. In this case, the state change is performed by some but not all processes, resulting in global state/behavior inconsistencies and possibly deadlocks. In general, a state inconsistency is not automatically detected and recovered by the process engine. Recovery in this case often has to be performed manually after checking execution traces, which is potentially slow, error prone and expensive. Existing solutions either shift the burden to business process developers or require additional infrastructure services support. For example, fault handling approaches require that the developers are aware of possible failures and their recovery strategies. Transaction approaches require a coordinator and coordination protocols deployed in the infrastructure layer. Our idea to solve this problem is to replace each original process by a robust counterpart, which is obtained from the original process through an automatic transformation, before deployment on the process engine. The robust process is deployed with the same infrastructure services and automatically recovers from message loss and state inconsistencies caused by system crashes and network failures. In other words, the robust processes are transparent to developers while leaving the infrastructure unmodified. We assume a synchronous interaction scenario for collaborative processes. With this scenario, an initiator sends a request message to a responder, and waits for a response message, while a responder receives the request message, applies some state change and sends the response messages. With our proposed transformation we obtain robust processes, where each process in the responder role caches the response message if its state has changed by the previously received request message. The possible state inconsistencies are recognized by using timers and information provided by the infrastructure, and resolved by using cached state and by retrying failed interactions. We also considered more complex interaction scenarios with multiple initiator and responder instances (1-n, n-1 and n-n client-server configurations). We have provided a formal proof of the correctness of our transformation solution. We have also done a performance analysis and determined the overhead of the generated (robust) processes compared to the original processes. Since this overhead is low compared to the performance differences that exist as a consequence of using different process engines, we argue that the generated robust processes have applicability in real life business environments. By doing this work, we have learnt the possible failure situations that affect the global state/behavior of collaborative business processes. Furthermore, we have defined transformations for deriving robust processes that are capable of surviving the identified failures