A Branch-and-Reduce Algorithm for Finding a Minimum Independent Dominating Set

An independent dominating set D of a graph G = (V,E) is a subset of vertices such that every vertex in V \ D has at least one neighbor in D and D is an independent set, i.e. no two vertices of D are adjacent in G. Finding a minimum independent dominating set in a graph is an NP-hard problem. Whereas it is hard to cope with this problem using parameterized and approximation algorithms, there is a simple exact O(1.4423^n)-time algorithm solving the problem by enumerating all maximal independent sets. In this paper we improve the latter result, providing the first non trivial algorithm computing a minimum independent dominating set of a graph in time O(1.3569^n). Furthermore, we give a lower bound of \Omega(1.3247^n) on the worst-case running time of this algorithm, showing that the running time analysis is almost tight.Comment: Full version. A preliminary version appeared in the proceedings of WG 200

An Even Faster and More Unifying Algorithm for Comparing Trees via Unbalanced Bipartite Matchings

A widely used method for determining the similarity of two labeled trees is to compute a maximum agreement subtree of the two trees. Previous work on this similarity measure is only concerned with the comparison of labeled trees of two special kinds, namely, uniformly labeled trees (i.e., trees with all their nodes labeled by the same symbol) and evolutionary trees (i.e., leaf-labeled trees with distinct symbols for distinct leaves). This paper presents an algorithm for comparing trees that are labeled in an arbitrary manner. In addition to this generality, this algorithm is faster than the previous algorithms. Another contribution of this paper is on maximum weight bipartite matchings. We show how to speed up the best known matching algorithms when the input graphs are node-unbalanced or weight-unbalanced. Based on these enhancements, we obtain an efficient algorithm for a new matching problem called the hierarchical bipartite matching problem, which is at the core of our maximum agreement subtree algorithm.Comment: To appear in Journal of Algorithm

Optimality program in segment and string graphs

Planar graphs are known to allow subexponential algorithms running in time $2^{O(\sqrt n)}$ or $2^{O(\sqrt n \log n)}$ for most of the paradigmatic problems, while the brute-force time $2^{\Theta(n)}$ is very likely to be asymptotically best on general graphs. Intrigued by an algorithm packing curves in $2^{O(n^{2/3}\log n)}$ by Fox and Pach [SODA'11], we investigate which problems have subexponential algorithms on the intersection graphs of curves (string graphs) or segments (segment intersection graphs) and which problems have no such algorithms under the ETH (Exponential Time Hypothesis). Among our results, we show that, quite surprisingly, 3-Coloring can also be solved in time $2^{O(n^{2/3}\log^{O(1)}n)}$ on string graphs while an algorithm running in time $2^{o(n)}$ for 4-Coloring even on axis-parallel segments (of unbounded length) would disprove the ETH. For 4-Coloring of unit segments, we show a weaker ETH lower bound of $2^{o(n^{2/3})}$ which exploits the celebrated Erd\H{o}s-Szekeres theorem. The subexponential running time also carries over to Min Feedback Vertex Set but not to Min Dominating Set and Min Independent Dominating Set.Comment: 19 pages, 15 figure

08431 Abstracts Collection -- Moderately Exponential Time Algorithms

From $19/10/2008$ to $24/10/2008$, the Dagstuhl Seminar 08431 ``Moderately Exponential Time Algorithms \u27\u27 was held in Schloss Dagstuhl~--~Leibniz Center for Informatics. During the seminar, several participants presented their current research, and ongoing work and open problems were discussed. Abstracts of the presentations given during the seminar as well as abstracts of seminar results and ideas are put together in this paper. The first section describes the seminar topics and goals in general. Links to extended abstracts or full papers are provided, if available

A Faster Exact Algorithm for the Directed Maximum Leaf Spanning Tree Problem

Given a directed graph $G=(V,A)$, the Directed Maximum Leaf Spanning Tree problem asks to compute a directed spanning tree (i.e., an out-branching) with as many leaves as possible. By designing a Branch-and-Reduced algorithm combined with the Measure & Conquer technique for running time analysis, we show that the problem can be solved in time \Oh^*(1.9043^n) using polynomial space. Hitherto, there have been only few examples. Provided exponential space this run time upper bound can be lowered to \Oh^*(1.8139^n)