Sparse Radial Sampling LBP for Writer Identification

In this paper we present the use of Sparse Radial Sampling Local Binary Patterns, a variant of Local Binary Patterns (LBP) for text-as-texture classification. By adapting and extending the standard LBP operator to the particularities of text we get a generic text-as-texture classification scheme and apply it to writer identification. In experiments on CVL and ICDAR 2013 datasets, the proposed feature-set demonstrates State-Of-the-Art (SOA) performance. Among the SOA, the proposed method is the only one that is based on dense extraction of a single local feature descriptor. This makes it fast and applicable at the earliest stages in a DIA pipeline without the need for segmentation, binarization, or extraction of multiple features.Comment: Submitted to the 13th International Conference on Document Analysis and Recognition (ICDAR 2015

Image segmentation with adaptive region growing based on a polynomial surface model

A new method for segmenting intensity images into smooth surface segments is presented. The main idea is to divide the image into flat, planar, convex, concave, and saddle patches that coincide as well as possible with meaningful object features in the image. Therefore, we propose an adaptive region growing algorithm based on low-degree polynomial fitting. The algorithm uses a new adaptive thresholding technique with the L∞ fitting cost as a segmentation criterion. The polynomial degree and the fitting error are automatically adapted during the region growing process. The main contribution is that the algorithm detects outliers and edges, distinguishes between strong and smooth intensity transitions and finds surface segments that are bent in a certain way. As a result, the surface segments corresponding to meaningful object features and the contours separating the surface segments coincide with real-image object edges. Moreover, the curvature-based surface shape information facilitates many tasks in image analysis, such as object recognition performed on the polynomial representation. The polynomial representation provides good image approximation while preserving all the necessary details of the objects in the reconstructed images. The method outperforms existing techniques when segmenting images of objects with diffuse reflecting surfaces

Automatic quantification of the microvascular density on whole slide images, applied to paediatric brain tumours

Angiogenesis is a key phenomenon for tumour progression, diagnosis and treatment in brain tumours and more generally in oncology. Presently, its precise, direct quantitative assessment can only be done on whole tissue sections immunostained to reveal vascular endothelial cells. But this is a tremendous task for the pathologist and a challenge for the computer since digitised whole tissue sections, whole slide images (WSI), contain typically around ten gigapixels. We define and implement an algorithm that determines automatically, on a WSI at objective magnification $40\times$, the regions of tissue, the regions without blur and the regions of large puddles of red blood cells, and constructs the mask of blur-free, significant tissue on the WSI. Then it calibrates automatically the optical density ratios of the immunostaining of the vessel walls and of the counterstaining, performs a colour deconvolution inside the regions of blur-free tissue, and finds the vessel walls inside these regions by selecting, on the image resulting from the colour deconvolution, zones which satisfy a double-threshold criterion. A mask of vessel wall regions on the WSI is produced. The density of microvessels is finally computed as the fraction of the area of significant tissue which is occupied by vessel walls. We apply this algorithm to a set of 186 WSI of paediatric brain tumours from World Health Organisation grades I to IV. The segmentations are of very good quality although the set of slides is very heterogeneous. The computation time is of the order of a fraction of an hour for each WSI on a modest computer. The computed microvascular density is found to be robust and strongly correlates with the tumour grade. This method requires no training and can easily be applied to other tumour types and other stainings

Image Retrieval Using Gradient Operators

The images are described by its content like color, texture, and shape information present in them.In this paper novel image retrieval methods discussed based on shape features extracted using gradient operators like Robert, Sobel, Prewitt and Canny. Masking of Gradient operators takes place for continuing the discontinue edges. Morphological operations like erosion and dilation are used along with canny. The proposed image retrieval techniques are tested on generic image database images spread across different categories. Gradient operators features are extracted using Figure of Merit (FOM). The average precision and recall of all queries are computed and considered for performance analysis. The performance ranking of the masks for proposed image retrieval methods can be listed as Robert, Canny, Prewitt, and Sobel

CompaCT: Fractal-Based Heuristic Pixel Segmentation for Lossless Compression of High-Color DICOM Medical Images

Medical image compression is a widely studied field of data processing due to its prevalence in modern digital databases. This domain requires a high color depth of 12 bits per pixel component for accurate analysis by physicians, primarily in the DICOM format. Standard raster-based compression of images via filtering is well-known; however, it remains suboptimal in the medical domain due to non-specialized implementations. This study proposes a lossless medical image compression algorithm, CompaCT, that aims to target spatial features and patterns of pixel concentration for dynamically enhanced data processing. The algorithm employs fractal pixel traversal coupled with a novel approach of segmentation and meshing between pixel blocks for preprocessing. Furthermore, delta and entropy coding are applied to this concept for a complete compression pipeline. The proposal demonstrates that the data compression achieved via fractal segmentation preprocessing yields enhanced image compression results while remaining lossless in its reconstruction accuracy. CompaCT is evaluated in its compression ratios on 3954 high-color CT scans against the efficiency of industry-standard compression techniques (i.e., JPEG2000, RLE, ZIP, PNG). Its reconstruction performance is assessed with error metrics to verify lossless image recovery after decompression. The results demonstrate that CompaCT can compress and losslessly reconstruct medical images, being 37% more space-efficient than industry-standard compression systems.Comment: (8/24/2023) v1a: 16 pages, 9 figures, Word PD

Hemorrhage Detection and Segmentation in Traumatic Pelvic Injuries

Automated hemorrhage detection and segmentation in traumatic pelvic injuries is vital for fast and accurate treatment decision making. Hemorrhage is the main cause of deaths in patients within first 24 hours after the injury. It is very time consuming for physicians to analyze all Computed Tomography (CT) images manually. As time is crucial in emergence medicine, analyzing medical images manually delays the decision-making process. Automated hemorrhage detection and segmentation can significantly help physicians to analyze these images and make fast and accurate decisions. Hemorrhage segmentation is a crucial step in the accurate diagnosis and treatment decision-making process. This paper presents a novel rule-based hemorrhage segmentation technique that utilizes pelvic anatomical information to segment hemorrhage accurately. An evaluation measure is used to quantify the accuracy of hemorrhage segmentation. The results show that the proposed method is able to segment hemorrhage very well, and the results are promising

The relationship between radiomics and pathomics in Glioblastoma patients: Preliminary results from a cross-scale association study

: Glioblastoma multiforme (GBM) typically exhibits substantial intratumoral heterogeneity at both microscopic and radiological resolution scales. Diffusion Weighted Imaging (DWI) and dynamic contrast-enhanced (DCE) magnetic resonance imaging (MRI) are two functional MRI techniques that are commonly employed in clinic for the assessment of GBM tumor characteristics. This work presents initial results aiming at determining if radiomics features extracted from preoperative ADC maps and post-contrast T1 (T1C) images are associated with pathomic features arising from H&E digitized pathology images. 48 patients from the public available CPTAC-GBM database, for which both radiology and pathology images were available, were involved in the study. 91 radiomics features were extracted from ADC maps and post-contrast T1 images using PyRadiomics. 65 pathomic features were extracted from cell detection measurements from H&E images. Moreover, 91 features were extracted from cell density maps of H&E images at four different resolutions. Radiopathomic associations were evaluated by means of Spearman's correlation (ρ) and factor analysis. p values were adjusted for multiple correlations by using a false discovery rate adjustment. Significant cross-scale associations were identified between pathomics and ADC, both considering features (n = 186, 0.45 < ρ < 0.74 in absolute value) and factors (n = 5, 0.48 < ρ < 0.54 in absolute value). Significant but fewer ρ values were found concerning the association between pathomics and radiomics features (n = 53, 0.5 < ρ < 0.65 in absolute value) and factors (n = 2, ρ = 0.63 and ρ = 0.53 in absolute value). The results of this study suggest that cross-scale associations may exist between digital pathology and ADC and T1C imaging. This can be useful not only to improve the knowledge concerning GBM intratumoral heterogeneity, but also to strengthen the role of radiomics approach and its validation in clinical practice as "virtual biopsy", introducing new insights for omics integration toward a personalized medicine approach