Preparing HPC Applications for the Exascale Era: A Decoupling Strategy

Production-quality parallel applications are often a mixture of diverse operations, such as computation- and communication-intensive, regular and irregular, tightly coupled and loosely linked operations. In conventional construction of parallel applications, each process performs all the operations, which might result inefficient and seriously limit scalability, especially at large scale. We propose a decoupling strategy to improve the scalability of applications running on large-scale systems. Our strategy separates application operations onto groups of processes and enables a dataflow processing paradigm among the groups. This mechanism is effective in reducing the impact of load imbalance and increases the parallel efficiency by pipelining multiple operations. We provide a proof-of-concept implementation using MPI, the de-facto programming system on current supercomputers. We demonstrate the effectiveness of this strategy by decoupling the reduce, particle communication, halo exchange and I/O operations in a set of scientific and data-analytics applications. A performance evaluation on 8,192 processes of a Cray XC40 supercomputer shows that the proposed approach can achieve up to 4x performance improvement.Comment: The 46th International Conference on Parallel Processing (ICPP-2017

CGraph : a correlations-aware approach for efficient concurrent iterative graph processing

With the fast growing of iterative graph analysis applications, the graph processing platform has to efficiently handle massive Concurrent iterative Graph Processing (CGP) jobs. Although it has been extensively studied to optimize the execution of a single job, existing solutions face high ratio of data access cost to computation for the CGP jobs due to significant cache interference and memory wall, which incurs low throughput. In this work, we observed that there are strong spatial and temporal correlations among the data accesses issued by different CGP jobs because these concurrently running jobs usually need to repeatedly traverse the shared graph structure for the iterative processing of each vertex. Based on this observation, this paper proposes a correlations-aware execution model, together with a core-subgraph based scheduling algorithm, to enable these CGP jobs to efficiently share the graph structure data in cache/memory and their accesses by fully exploiting such correlations. It is able to achieve the efficient execution of the CGP jobs by effectively reducing their average ratio of data access cost to computation and therefore delivers a much higher throughput. In order to demonstrate the efficiency of the proposed approaches, a system called CGraph is developed and extensive experiments have been conducted. The experimental results show that CGraph improves the throughput of the CGP jobs by up to 2.31 times in comparison with the existing solutions

Towards Transaction as a Service

This paper argues for decoupling transaction processing from existing two-layer cloud-native databases and making transaction processing as an independent service. By building a transaction as a service (TaaS) layer, the transaction processing can be independently scaled for high resource utilization and can be independently upgraded for development agility. Accordingly, we architect an execution-transaction-storage three-layer cloud-native database. By connecting to TaaS, 1) the AP engines can be empowered with ACID TP capability, 2) multiple standalone TP engine instances can be incorporated to support multi-master distributed TP for horizontal scalability, 3) multiple execution engines with different data models can be integrated to support multi-model transactions, and 4) high performance TP is achieved through extensive TaaS optimizations and consistent evolution. Cloud-native databases deserve better architecture: we believe that TaaS provides a path forward to better cloud-native databases

GraphM : an efficient storage system for high throughput of concurrent graph processing

With the rapidly growing demand of graph processing in the real world, a large number of iterative graph processing jobs run concurrently on the same underlying graph. However, the storage engines of existing graph processing frameworks are mainly designed for running an individual job. Our studies show that they are inefficient when running concurrent jobs due to the redundant data storage and access overhead. To cope with this issue, we develop an efficient storage system, called GraphM. It can be integrated into the existing graph processing systems to efficiently support concurrent iterative graph processing jobs for higher throughput by fully exploiting the similarities of the data accesses between these concurrent jobs. GraphM regularizes the traversing order of the graph partitions for concurrent graph processing jobs by streaming the partitions into the main memory and the Last-Level Cache (LLC) in a common order, and then processes the related jobs concurrently in a novel fine-grained synchronization. In this way, the concurrent jobs share the same graph structure data in the LLC/memory and also the data accesses to the graph, so as to amortize the storage consumption and the data access overhead. To demonstrate the efficiency of GraphM, we plug it into state-of-the-art graph processing systems, including GridGraph, GraphChi, PowerGraph, and Chaos. Experiments results show that GraphM improves the throughput by 1.73~13 times