SgpDec : Cascade (de)compositions of finite transformation semigroups and permutation groups

We describe how the SgpDec computer algebra package can be used for composing and decomposing permutation groups and transformation semigroups hierarchically by directly constructing substructures of wreath products, the so called cascade products.Final Accepted Versio

Exploring the concept of interaction computing through the discrete algebraic analysis of the Belousov–Zhabotinsky reaction

Interaction computing (IC) aims to map the properties of integrable low-dimensional non-linear dynamical systems to the discrete domain of finite-state automata in an attempt to reproduce in software the self-organizing and dynamically stable properties of sub-cellular biochemical systems. As the work reported in this paper is still at the early stages of theory development it focuses on the analysis of a particularly simple chemical oscillator, the Belousov-Zhabotinsky (BZ) reaction. After retracing the rationale for IC developed over the past several years from the physical, biological, mathematical, and computer science points of view, the paper presents an elementary discussion of the Krohn-Rhodes decomposition of finite-state automata, including the holonomy decomposition of a simple automaton, and of its interpretation as an abstract positional number system. The method is then applied to the analysis of the algebraic properties of discrete finite-state automata derived from a simplified Petri net model of the BZ reaction. In the simplest possible and symmetrical case the corresponding automaton is, not surprisingly, found to contain exclusively cyclic groups. In a second, asymmetrical case, the decomposition is much more complex and includes five different simple non-abelian groups whose potential relevance arises from their ability to encode functionally complete algebras. The possible computational relevance of these findings is discussed and possible conclusions are drawn

Algebraic hierarchical decomposition of finite state automata : a computational approach

The theory of algebraic hierarchical decomposition of finite state automata is an important and well developed branch of theoretical computer science (Krohn-Rhodes Theory). Beyond this it gives a general model for some important aspects of our cognitive capabilities and also provides possible means for constructing artificial cognitive systems: a Krohn-Rhodes decomposition may serve as a formal model of understanding since we comprehend the world around us in terms of hierarchical representations. In order to investigate formal models of understanding using this approach, we need efficient tools but despite the significance of the theory there has been no computational implementation until this work. Here the main aim was to open up the vast space of these decompositions by developing a computational toolkit and to make the initial steps of the exploration. Two different decomposition methods were implemented: the VuT and the holonomy decomposition. Since the holonomy method, unlike the VUT method, gives decompositions of reasonable lengths, it was chosen for a more detailed study. In studying the holonomy decomposition our main focus is to develop techniques which enable us to calculate the decompositions efficiently, since eventually we would like to apply the decompositions for real-world problems. As the most crucial part is finding the the group components we present several different ways for solving this problem. Then we investigate actual decompositions generated by the holonomy method: automata with some spatial structure illustrating the core structure of the holonomy decomposition, cases for showing interesting properties of the decomposition (length of the decomposition, number of states of a component), and the decomposition of finite residue class rings of integers modulo n. Finally we analyse the applicability of the holonomy decompositions as formal theories of understanding, and delineate the directions for further research