Automatic Concept Extraction in Semantic Summarization Process

The Semantic Web offers a generic infrastructure for interchange, integration and creative reuse of structured data, which can help to cross some of the boundaries that Web 2.0 is facing. Currently, Web 2.0 offers poor query possibilities apart from searching by keywords or tags. There has been a great deal of interest in the development of semantic-based systems to facilitate knowledge representation and extraction and content integration [1], [2]. Semantic-based approach to retrieving relevant material can be useful to address issues like trying to determine the type or the quality of the information suggested from a personalized environment. In this context, standard keyword search has a very limited effectiveness. For example, it cannot filter for the type of information, the level of information or the quality of information. Potentially, one of the biggest application areas of content-based exploration might be personalized searching framework (e.g., [3],[4]). Whereas search engines provide nowadays largely anonymous information, new framework might highlight or recommend web pages related to key concepts. We can consider semantic information representation as an important step towards a wide efficient manipulation and retrieval of information [5], [6], [7]. In the digital library community a flat list of attribute/value pairs is often assumed to be available. In the Semantic Web community, annotations are often assumed to be an instance of an ontology. Through the ontologies the system will express key entities and relationships describing resources in a formal machine-processable representation. An ontology-based knowledge representation could be used for content analysis and object recognition, for reasoning processes and for enabling user-friendly and intelligent multimedia content search and retrieval. Text summarization has been an interesting and active research area since the 60’s. The definition and assumption are that a small portion or several keywords of the original long document can represent the whole informatively and/or indicatively. Reading or processing this shorter version of the document would save time and other resources [8]. This property is especially true and urgently needed at present due to the vast availability of information. Concept-based approach to represent dynamic and unstructured information can be useful to address issues like trying to determine the key concepts and to summarize the information exchanged within a personalized environment. In this context, a concept is represented with a Wikipedia article. With millions of articles and thousands of contributors, this online repository of knowledge is the largest and fastest growing encyclopedia in existence. The problem described above can then be divided into three steps: • Mapping of a series of terms with the most appropriate Wikipedia article (disambiguation). • Assigning a score for each item identified on the basis of its importance in the given context. • Extraction of n items with the highest score. Text summarization can be applied to many fields: from information retrieval to text mining processes and text display. Also in personalized searching framework text summarization could be very useful. The chapter is organized as follows: the next Section introduces personalized searching framework as one of the possible application areas of automatic concept extraction systems. Section three describes the summarization process, providing details on system architecture, used methodology and tools. Section four provides an overview about document summarization approaches that have been recently developed. Section five summarizes a number of real-world applications which might benefit from WSD. Section six introduces Wikipedia and WordNet as used in our project. Section seven describes the logical structure of the project, describing software components and databases. Finally, Section eight provides some consideration..

Patient Record Summarization Through Joint Phenotype Learning and Interactive Visualization

Complex patient are becoming more and more of a challenge to the health care system given the amount of care they require and the amount of documentation needed to keep track of their state of health and treatment. Record keeping using the EHR makes this easier but mounting amounts of patient data also means that clinicians are faced with information overload. Information overload has been shown to have deleterious effects on care, with increased safety concerns due to missed information. Patient record summarization has been a promising mitigator for information overload. Subsequently, a lot of research has been dedicated to record summarization since the introduction of EHRs. In this dissertation we examine whether unsupervised inference methods can derive patient problem-oriented summaries, that are robust to different patients. By grounding our experiments with HIV patients we leverage the data of a group of patients that are similar in that they share one common disease (HIV) but also exhibit complex histories of diverse comorbidities. Using a user-centered, iterative design process, we design an interactive, longitudinal patient record summarization tool, that leverages automated inferences about the patient's problems. We find that unsupervised, joint learning of problems using correlated topic models, adapted to handle the multiple data types (structured and unstructured) of the EHR, is successful in identifying the salient problems of complex patients. Utilizing interactive visualization that exposes inference results to users enables them to make sense of a patient's problems over time and to answer questions about a patient more accurately and faster than using the EHR alone

Knowledge-Based Visualization of Time-Oriented Clinical Data

We describe a domain-independent framework (KNAVE) specific to the task of interpretation, summarization, visualization, explanation, and interactive navigation in a context-sensitive manner through time-oriented raw clinical data and the multiple levels of higher-level, interval-based concepts that can be abstracted from these data. The KNAVE navigation operators, which are independent of any particular clinical domain, access a knowledge base of temporal properties of measured data and interventions that is specific to the clinical domain. Thus, domainspecific knowledge underlies the semantics of the domain-independent interpretation, visualization, and navigation processes. Initial evaluation of the KNAVE prototype by a small number of users with variable clinical and informatics training has been encouraging