10,444 research outputs found
Time frequency analysis in terahertz pulsed imaging
Recent advances in laser and electro-optical technologies have made the previously under-utilized terahertz frequency band of the electromagnetic spectrum
accessible for practical imaging. Applications are emerging, notably in the biomedical domain. In this chapter the technique of terahertz pulsed imaging is
introduced in some detail. The need for special computer vision methods, which arises from the use of pulses of radiation and the acquisition of a time series at
each pixel, is described. The nature of the data is a challenge since we are interested not only in the frequency composition of the pulses, but also how these differ for different parts of the pulse. Conventional and short-time Fourier transforms and wavelets were used in preliminary experiments on the analysis of terahertz
pulsed imaging data. Measurements of refractive index and absorption coefficient were compared, wavelet compression assessed and image classification by multidimensional
clustering techniques demonstrated. It is shown that the timefrequency methods perform as well as conventional analysis for determining material properties. Wavelet compression gave results that were robust through compressions that used only 20% of the wavelet coefficients. It is concluded that the time-frequency methods hold great promise for optimizing the extraction of the spectroscopic information contained in each terahertz pulse, for the analysis of more complex signals comprising multiple pulses or from recently introduced acquisition techniques
Automated analysis of quantitative image data using isomorphic functional mixed models, with application to proteomics data
Image data are increasingly encountered and are of growing importance in many
areas of science. Much of these data are quantitative image data, which are
characterized by intensities that represent some measurement of interest in the
scanned images. The data typically consist of multiple images on the same
domain and the goal of the research is to combine the quantitative information
across images to make inference about populations or interventions. In this
paper we present a unified analysis framework for the analysis of quantitative
image data using a Bayesian functional mixed model approach. This framework is
flexible enough to handle complex, irregular images with many local features,
and can model the simultaneous effects of multiple factors on the image
intensities and account for the correlation between images induced by the
design. We introduce a general isomorphic modeling approach to fitting the
functional mixed model, of which the wavelet-based functional mixed model is
one special case. With suitable modeling choices, this approach leads to
efficient calculations and can result in flexible modeling and adaptive
smoothing of the salient features in the data. The proposed method has the
following advantages: it can be run automatically, it produces inferential
plots indicating which regions of the image are associated with each factor, it
simultaneously considers the practical and statistical significance of
findings, and it controls the false discovery rate.Comment: Published in at http://dx.doi.org/10.1214/10-AOAS407 the Annals of
Applied Statistics (http://www.imstat.org/aoas/) by the Institute of
Mathematical Statistics (http://www.imstat.org
Communication channel analysis and real time compressed sensing for high density neural recording devices
Next generation neural recording and Brain-
Machine Interface (BMI) devices call for high density or distributed
systems with more than 1000 recording sites. As the
recording site density grows, the device generates data on the
scale of several hundred megabits per second (Mbps). Transmitting
such large amounts of data induces significant power
consumption and heat dissipation for the implanted electronics.
Facing these constraints, efficient on-chip compression techniques
become essential to the reduction of implanted systems power
consumption. This paper analyzes the communication channel
constraints for high density neural recording devices. This paper
then quantifies the improvement on communication channel
using efficient on-chip compression methods. Finally, This paper
describes a Compressed Sensing (CS) based system that can
reduce the data rate by > 10x times while using power on
the order of a few hundred nW per recording channel
3D medical volume segmentation using hybrid multiresolution statistical approaches
This article is available through the Brunel Open Access Publishing Fund. Copyright © 2010 S AlZu’bi and A Amira.3D volume segmentation is the process of partitioning voxels into 3D regions (subvolumes) that represent meaningful physical entities which are more meaningful and easier to analyze and usable in future applications. Multiresolution Analysis (MRA) enables the preservation of an image according to certain levels of resolution or blurring. Because of multiresolution quality, wavelets have been deployed in image compression, denoising, and classification. This paper focuses on the implementation of efficient medical volume segmentation techniques. Multiresolution analysis including 3D wavelet and ridgelet has been used for feature extraction which can be modeled using Hidden Markov Models (HMMs) to segment the volume slices. A comparison study has been carried out to evaluate 2D and 3D techniques which reveals that 3D methodologies can accurately detect the Region Of Interest (ROI). Automatic segmentation has been achieved using HMMs where the ROI is detected accurately but suffers a long computation time for its calculations
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