An unconditionally energy stable and positive upwind DG scheme for the Keller-Segel model

The well-suited discretization of the Keller-Segel equations for chemotaxis has become a very challenging problem due to the convective nature inherent to them. This paper aims to introduce a new upwind, mass-conservative, positive and energy-dissipative discontinuous Galerkin scheme for the Keller-Segel model. This approach is based on the gradient-flow structure of the equations. In addition, we show some numerical experiments in accordance with the aforementioned properties of the discretization. The numerical results obtained emphasize the really good behaviour of the approximation in the case of chemotactic collapse, where very steep gradients appear.Comment: 24 pages, 17 figures, 4 table

Small Collaboration: Advanced Numerical Methods for Nonlinear Hyperbolic Balance Laws and Their Applications (hybrid meeting)

This small collaborative workshop brought together experts from the Sino-German project working in the field of advanced numerical methods for hyperbolic balance laws. These are particularly important for compressible fluid flows and related systems of equations. The investigated numerical methods were finite volume/finite difference, discontinuous Galerkin methods, and kinetic-type schemes. We have discussed challenging open mathematical research problems in this field, such as multidimensional shock waves, interfaces with different phases or efficient and problem suited adaptive algorithms. Consequently, our main objective was to discuss novel high-order accurate schemes that reliably approximate underlying physical models and preserve important physically relevant properties. Theoretical questions concerning the convergence of numerical methods and proper solution concepts were addressed as well

A posteriori error analysis of a positivity preserving scheme for the power-law diffusion Keller-Segel model

We study a finite volume scheme approximating a parabolic-elliptic Keller-Segel system with power law diffusion with exponent $\gamma \in [1,3]$ and periodic boundary conditions. We derive conditional a posteriori bounds for the error measured in the $L^\infty(0,T;H^1(\Omega))$ norm for the chemoattractant and by a quasi-norm-like quantity for the density. These results are based on stability estimates and suitable conforming reconstructions of the numerical solution. We perform numerical experiments showing that our error bounds are linear in mesh width and elucidating the behaviour of the error estimator under changes of $\gamma$.Comment: 26 pages, 2 figures, 3 table

A Novel Stochastic Interacting Particle-Field Algorithm for 3D Parabolic-Parabolic Keller-Segel Chemotaxis System

We introduce an efficient stochastic interacting particle-field (SIPF) algorithm with no history dependence for computing aggregation patterns and near singular solutions of parabolic-parabolic Keller-Segel (KS) chemotaxis system in three space dimensions (3D). The KS solutions are approximated as empirical measures of particles coupled with a smoother field (concentration of chemo-attractant) variable computed by the spectral method. Instead of using heat kernels causing history dependence and high memory cost, we leverage the implicit Euler discretization to derive a one-step recursion in time for stochastic particle positions and the field variable based on the explicit Green's function of an elliptic operator of the form Laplacian minus a positive constant. In numerical experiments, we observe that the resulting SIPF algorithm is convergent and self-adaptive to the high gradient part of solutions. Despite the lack of analytical knowledge (e.g. a self-similar ansatz) of the blowup, the SIPF algorithm provides a low-cost approach to study the emergence of finite time blowup in 3D by only dozens of Fourier modes and through varying the amount of initial mass and tracking the evolution of the field variable. Notably, the algorithm can handle at ease multi-modal initial data and the subsequent complex evolution involving the merging of particle clusters and formation of a finite time singularity