Development of Distributed Research Center for analysis of regional climatic and environmental changes

We present an approach and first results of a collaborative project being carried out by a joint team of researchers from the Institute of Monitoring of Climatic and Ecological Systems, Russia and Earth Systems Research Center UNH, USA. Its main objective is development of a hardware and software platform prototype of a Distributed Research Center (DRC) for monitoring and projecting of regional climatic and environmental changes in the Northern extratropical areas. The DRC should provide the specialists working in climate related sciences and decision-makers with accurate and detailed climatic characteristics for the selected area and reliable and affordable tools for their in-depth statistical analysis and studies of the effects of climate change. Within the framework of the project, new approaches to cloud processing and analysis of large geospatial datasets (big geospatial data) inherent to climate change studies are developed and deployed on technical platforms of both institutions. We discuss here the state of the art in this domain, describe web based information-computational systems developed by the partners, justify the methods chosen to reach the project goal, and briefly list the results obtained so far

Grids and the Virtual Observatory

We consider several projects from astronomy that benefit from the Grid paradigm and associated technology, many of which involve either massive datasets or the federation of multiple datasets. We cover image computation (mosaicking, multi-wavelength images, and synoptic surveys); database computation (representation through XML, data mining, and visualization); and semantic interoperability (publishing, ontologies, directories, and service descriptions)

The Metropolitan Travel Survey Archive: A Case Study in Archiving

This paper summarizes research on standards for archiving travel survey data. It then describes some of the efforts at organizing data and developing metadata. The development of metadata standards used for documenting datasets using DDI (Data Documentation Initiative) for DTD (Document Type Definitions) is described. A case, applying these approaches to a US Metropolitan Travel Survey Archive is presented. The Metropolitan Travel Survey Archive, housed at the University of Minnesota, now contains over 60 surveys from almost 30 metropolitan areas. The paper concludes with some recommendations for archiving data.Travel Surveys, Activity Surveys, Archiving

High Energy Physics Forum for Computational Excellence: Working Group Reports (I. Applications Software II. Software Libraries and Tools III. Systems)

Computing plays an essential role in all aspects of high energy physics. As computational technology evolves rapidly in new directions, and data throughput and volume continue to follow a steep trend-line, it is important for the HEP community to develop an effective response to a series of expected challenges. In order to help shape the desired response, the HEP Forum for Computational Excellence (HEP-FCE) initiated a roadmap planning activity with two key overlapping drivers -- 1) software effectiveness, and 2) infrastructure and expertise advancement. The HEP-FCE formed three working groups, 1) Applications Software, 2) Software Libraries and Tools, and 3) Systems (including systems software), to provide an overview of the current status of HEP computing and to present findings and opportunities for the desired HEP computational roadmap. The final versions of the reports are combined in this document, and are presented along with introductory material.Comment: 72 page

Representing Dataset Quality Metadata using Multi-Dimensional Views

Data quality is commonly defined as fitness for use. The problem of identifying quality of data is faced by many data consumers. Data publishers often do not have the means to identify quality problems in their data. To make the task for both stakeholders easier, we have developed the Dataset Quality Ontology (daQ). daQ is a core vocabulary for representing the results of quality benchmarking of a linked dataset. It represents quality metadata as multi-dimensional and statistical observations using the Data Cube vocabulary. Quality metadata are organised as a self-contained graph, which can, e.g., be embedded into linked open datasets. We discuss the design considerations, give examples for extending daQ by custom quality metrics, and present use cases such as analysing data versions, browsing datasets by quality, and link identification. We finally discuss how data cube visualisation tools enable data publishers and consumers to analyse better the quality of their data.Comment: Preprint of a paper submitted to the forthcoming SEMANTiCS 2014, 4-5 September 2014, Leipzig, German

ImmPort, toward repurposing of open access immunological assay data for translational and clinical research

Immunology researchers are beginning to explore the possibilities of reproducibility, reuse and secondary analyses of immunology data. Open-access datasets are being applied in the validation of the methods used in the original studies, leveraging studies for meta-analysis, or generating new hypotheses. To promote these goals, the ImmPort data repository was created for the broader research community to explore the wide spectrum of clinical and basic research data and associated findings. The ImmPort ecosystem consists of four components–Private Data, Shared Data, Data Analysis, and Resources—for data archiving, dissemination, analyses, and reuse. To date, more than 300 studies have been made freely available through the ImmPort Shared Data portal , which allows research data to be repurposed to accelerate the translation of new insights into discoveries