Algorithms for Low-Distortion Embeddings into Arbitrary 1-Dimensional Spaces

We study the problem of finding a minimum-distortion embedding of the shortest path metric of an unweighted graph into a "simpler" metric X. Computing such an embedding (exactly or approximately) is a non-trivial task even when X is the metric induced by a path, or, equivalently, the real line. In this paper we give approximation and fixed-parameter tractable (FPT) algorithms for minimum-distortion embeddings into the metric of a subdivision of some fixed graph H, or, equivalently, into any fixed 1-dimensional simplicial complex. More precisely, we study the following problem: For given graphs G, H and integer c, is it possible to embed G with distortion c into a graph homeomorphic to H? Then embedding into the line is the special case H=K_2, and embedding into the cycle is the case H=K_3, where K_k denotes the complete graph on k vertices. For this problem we give - an approximation algorithm, which in time f(H)* poly (n), for some function f, either correctly decides that there is no embedding of G with distortion c into any graph homeomorphic to H, or finds an embedding with distortion poly(c); - an exact algorithm, which in time f\u27(H, c)* poly (n), for some function f\u27, either correctly decides that there is no embedding of G with distortion c into any graph homeomorphic to H, or finds an embedding with distortion c. Prior to our work, poly(OPT)-approximation or FPT algorithms were known only for embedding into paths and trees of bounded degrees

Probabilistic embeddings of the Fr\'echet distance

The Fr\'echet distance is a popular distance measure for curves which naturally lends itself to fundamental computational tasks, such as clustering, nearest-neighbor searching, and spherical range searching in the corresponding metric space. However, its inherent complexity poses considerable computational challenges in practice. To address this problem we study distortion of the probabilistic embedding that results from projecting the curves to a randomly chosen line. Such an embedding could be used in combination with, e.g. locality-sensitive hashing. We show that in the worst case and under reasonable assumptions, the discrete Fr\'echet distance between two polygonal curves of complexity $t$ in $\mathbb{R}^d$, where $d\in\lbrace 2,3,4,5\rbrace$, degrades by a factor linear in $t$ with constant probability. We show upper and lower bounds on the distortion. We also evaluate our findings empirically on a benchmark data set. The preliminary experimental results stand in stark contrast with our lower bounds. They indicate that highly distorted projections happen very rarely in practice, and only for strongly conditioned input curves. Keywords: Fr\'echet distance, metric embeddings, random projectionsComment: 27 pages, 11 figure

Line-distortion, Bandwidth and Path-length of a graph

We investigate the minimum line-distortion and the minimum bandwidth problems on unweighted graphs and their relations with the minimum length of a Robertson-Seymour's path-decomposition. The length of a path-decomposition of a graph is the largest diameter of a bag in the decomposition. The path-length of a graph is the minimum length over all its path-decompositions. In particular, we show: - if a graph $G$ can be embedded into the line with distortion $k$, then $G$ admits a Robertson-Seymour's path-decomposition with bags of diameter at most $k$ in $G$; - for every class of graphs with path-length bounded by a constant, there exist an efficient constant-factor approximation algorithm for the minimum line-distortion problem and an efficient constant-factor approximation algorithm for the minimum bandwidth problem; - there is an efficient 2-approximation algorithm for computing the path-length of an arbitrary graph; - AT-free graphs and some intersection families of graphs have path-length at most 2; - for AT-free graphs, there exist a linear time 8-approximation algorithm for the minimum line-distortion problem and a linear time 4-approximation algorithm for the minimum bandwidth problem

Learning Lines with Ordinal Constraints

We study the problem of finding a mapping f from a set of points into the real line, under ordinal triple constraints. An ordinal constraint for a triple of points (u,v,w) asserts that |f(u)-f(v)| < |f(u)-f(w)|. We present an approximation algorithm for the dense case of this problem. Given an instance that admits a solution that satisfies (1-?)-fraction of all constraints, our algorithm computes a solution that satisfies (1-O(?^{1/8}))-fraction of all constraints, in time O(n?) + (1/?)^{O(1/?^{1/8})} n

Decomposing a Graph into Shortest Paths with Bounded Eccentricity

We introduce the problem of hub-laminar decomposition which generalizes that of computing a shortest path with minimum eccentricity (MESP). Intuitively, it consists in decomposing a graph into several paths that collectively have small eccentricity and meet only near their extremities. The problem is related to computing an isometric cycle with minimum eccentricity (MEIC). It is also linked to DNA reconstitution in the context of metagenomics in biology. We show that a graph having such a decomposition with long enough paths can be decomposed in polynomial time with approximated guaranties on the parameters of the decomposition. Moreover, such a decomposition with few paths allows to compute a compact representation of distances with additive distortion. We also show that having an isometric cycle with small eccentricity is related to the possibility of embedding the graph in a cycle with low distortion

FPT Algorithms for Embedding into Low Complexity Graphic Metrics

The Metric Embedding problem takes as input two metric spaces (X,D_X) and (Y,D_Y), and a positive integer d. The objective is to determine whether there is an embedding F:X - > Y such that the distortion d_{F} <= d. Such an embedding is called a distortion d embedding. In parameterized complexity, the Metric Embedding problem is known to be W-hard and therefore, not expected to have an FPT algorithm. In this paper, we consider the Gen-Graph Metric Embedding problem, where the two metric spaces are graph metrics. We explore the extent of tractability of the problem in the parameterized complexity setting. We determine whether an unweighted graph metric (G,D_G) can be embedded, or bijectively embedded, into another unweighted graph metric (H,D_H), where the graph H has low structural complexity. For example, H is a cycle, or H has bounded treewidth or bounded connected treewidth. The parameters for the algorithms are chosen from the upper bound d on distortion, bound Delta on the maximum degree of H, treewidth alpha of H, and the connected treewidth alpha_{c} of H. Our general approach to these problems can be summarized as trying to understand the behavior of the shortest paths in G under a low distortion embedding into H, and the structural relation the mapping of these paths has to shortest paths in H

Computing Bi-Lipschitz Outlier Embeddings into the Line

The problem of computing a bi-Lipschitz embedding of a graphical metric into the line with minimum distortion has received a lot of attention. The best-known approximation algorithm computes an embedding with distortion $O(c^2)$, where $c$ denotes the optimal distortion [B\u{a}doiu \etal~2005]. We present a bi-criteria approximation algorithm that extends the above results to the setting of \emph{outliers}. Specifically, we say that a metric space $(X,\rho)$ admits a $(k,c)$-embedding if there exists $K\subset X$, with $|K|=k$, such that $(X\setminus K, \rho)$ admits an embedding into the line with distortion at most $c$. Given $k\geq 0$, and a metric space that admits a $(k,c)$-embedding, for some $c\geq 1$, our algorithm computes a $({\mathsf p}{\mathsf o}{\mathsf l}{\mathsf y}(k, c, \log n), {\mathsf p}{\mathsf o}{\mathsf l}{\mathsf y}(c))$-embedding in polynomial time. This is the first algorithmic result for outlier bi-Lipschitz embeddings. Prior to our work, comparable outlier embeddings where known only for the case of additive distortion