Neural activity classification with machine learning models trained on interspike interval series data

The flow of information through the brain is reflected by the activity patterns of neural cells. Indeed, these firing patterns are widely used as input data to predictive models that relate stimuli and animal behavior to the activity of a population of neurons. However, relatively little attention was paid to single neuron spike trains as predictors of cell or network properties in the brain. In this work, we introduce an approach to neuronal spike train data mining which enables effective classification and clustering of neuron types and network activity states based on single-cell spiking patterns. This approach is centered around applying state-of-the-art time series classification/clustering methods to sequences of interspike intervals recorded from single neurons. We demonstrate good performance of these methods in tasks involving classification of neuron type (e.g. excitatory vs. inhibitory cells) and/or neural circuit activity state (e.g. awake vs. REM sleep vs. nonREM sleep states) on an open-access cortical spiking activity dataset

Hierarchical Metric Learning for Optical Remote Sensing Scene Categorization

We address the problem of scene classification from optical remote sensing (RS) images based on the paradigm of hierarchical metric learning. Ideally, supervised metric learning strategies learn a projection from a set of training data points so as to minimize intra-class variance while maximizing inter-class separability to the class label space. However, standard metric learning techniques do not incorporate the class interaction information in learning the transformation matrix, which is often considered to be a bottleneck while dealing with fine-grained visual categories. As a remedy, we propose to organize the classes in a hierarchical fashion by exploring their visual similarities and subsequently learn separate distance metric transformations for the classes present at the non-leaf nodes of the tree. We employ an iterative max-margin clustering strategy to obtain the hierarchical organization of the classes. Experiment results obtained on the large-scale NWPU-RESISC45 and the popular UC-Merced datasets demonstrate the efficacy of the proposed hierarchical metric learning based RS scene recognition strategy in comparison to the standard approaches.Comment: Undergoing revision in GRS

On Interpretability of Deep Learning based Skin Lesion Classifiers using Concept Activation Vectors

Deep learning based medical image classifiers have shown remarkable prowess in various application areas like ophthalmology, dermatology, pathology, and radiology. However, the acceptance of these Computer-Aided Diagnosis (CAD) systems in real clinical setups is severely limited primarily because their decision-making process remains largely obscure. This work aims at elucidating a deep learning based medical image classifier by verifying that the model learns and utilizes similar disease-related concepts as described and employed by dermatologists. We used a well-trained and high performing neural network developed by REasoning for COmplex Data (RECOD) Lab for classification of three skin tumours, i.e. Melanocytic Naevi, Melanoma and Seborrheic Keratosis and performed a detailed analysis on its latent space. Two well established and publicly available skin disease datasets, PH2 and derm7pt, are used for experimentation. Human understandable concepts are mapped to RECOD image classification model with the help of Concept Activation Vectors (CAVs), introducing a novel training and significance testing paradigm for CAVs. Our results on an independent evaluation set clearly shows that the classifier learns and encodes human understandable concepts in its latent representation. Additionally, TCAV scores (Testing with CAVs) suggest that the neural network indeed makes use of disease-related concepts in the correct way when making predictions. We anticipate that this work can not only increase confidence of medical practitioners on CAD but also serve as a stepping stone for further development of CAV-based neural network interpretation methods.Comment: Accepted for the IEEE International Joint Conference on Neural Networks (IJCNN) 202

Social relation recognition in egocentric photostreams

© 2019 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.This paper proposes an approach to automatically categorize the social interactions of a user wearing a photo-camera (2fpm), by relying solely on what the camera is seeing. The problem is challenging due to the overwhelming complexity of social life and the extreme intra-class variability of social interactions captured under unconstrained conditions. We adopt the formalization proposed in Bugental’s social theory, that groups human relations into five social domains with related categories. Our method is a new deep learning architecture that exploits the hierarchical structure of the label space and relies on a set of social attributes estimated at frame level to provide a semantic representation of social interactions. Experimental results on the new EgoSocialRelation dataset demonstrate the effectiveness of our proposal.Peer ReviewedPostprint (author's final draft

Social Relation Recognition in Egocentric Photostreams

This paper proposes an approach to automatically categorize the social interactions of a user wearing a photo-camera 2fpm, by relying solely on what the camera is seeing. The problem is challenging due to the overwhelming complexity of social life and the extreme intra-class variability of social interactions captured under unconstrained conditions. We adopt the formalization proposed in Bugental's social theory, that groups human relations into five social domains with related categories. Our method is a new deep learning architecture that exploits the hierarchical structure of the label space and relies on a set of social attributes estimated at frame level to provide a semantic representation of social interactions. Experimental results on the new EgoSocialRelation dataset demonstrate the effectiveness of our proposal.Comment: Accepted at ICIP 201