Negative circuits and sustained oscillations in asynchronous automata networks

The biologist Ren\'e Thomas conjectured, twenty years ago, that the presence of a negative feedback circuit in the interaction graph of a dynamical system is a necessary condition for this system to produce sustained oscillations. In this paper, we state and prove this conjecture for asynchronous automata networks, a class of discrete dynamical systems extensively used to model the behaviors of gene networks. As a corollary, we obtain the following fixed point theorem: given a product $X$ of $n$ finite intervals of integers, and a map $F$ from $X$ to itself, if the interaction graph associated with $F$ has no negative circuit, then $F$ has at least one fixed point

Design and Analysis of Distributed Averaging with Quantized Communication

Consider a network whose nodes have some initial values, and it is desired to design an algorithm that builds on neighbor to neighbor interactions with the ultimate goal of convergence to the average of all initial node values or to some value close to that average. Such an algorithm is called generically "distributed averaging," and our goal in this paper is to study the performance of a subclass of deterministic distributed averaging algorithms where the information exchange between neighboring nodes (agents) is subject to uniform quantization. With such quantization, convergence to the precise average cannot be achieved in general, but the convergence would be to some value close to it, called quantized consensus. Using Lyapunov stability analysis, we characterize the convergence properties of the resulting nonlinear quantized system. We show that in finite time and depending on initial conditions, the algorithm will either cause all agents to reach a quantized consensus where the consensus value is the largest quantized value not greater than the average of their initial values, or will lead all variables to cycle in a small neighborhood around the average. In the latter case, we identify tight bounds for the size of the neighborhood and we further show that the error can be made arbitrarily small by adjusting the algorithm's parameters in a distributed manner

Boolean networks synchronism sensitivity and XOR circulant networks convergence time

In this paper are presented first results of a theoretical study on the role of non-monotone interactions in Boolean automata networks. We propose to analyse the contribution of non-monotony to the diversity and complexity in their dynamical behaviours according to two axes. The first one consists in supporting the idea that non-monotony has a peculiar influence on the sensitivity to synchronism of such networks. It leads us to the second axis that presents preliminary results and builds an understanding of the dynamical behaviours, in particular concerning convergence times, of specific non-monotone Boolean automata networks called XOR circulant networks.Comment: In Proceedings AUTOMATA&JAC 2012, arXiv:1208.249

A Survey of Cellular Automata: Types, Dynamics, Non-uniformity and Applications

Cellular automata (CAs) are dynamical systems which exhibit complex global behavior from simple local interaction and computation. Since the inception of cellular automaton (CA) by von Neumann in 1950s, it has attracted the attention of several researchers over various backgrounds and fields for modelling different physical, natural as well as real-life phenomena. Classically, CAs are uniform. However, non-uniformity has also been introduced in update pattern, lattice structure, neighborhood dependency and local rule. In this survey, we tour to the various types of CAs introduced till date, the different characterization tools, the global behaviors of CAs, like universality, reversibility, dynamics etc. Special attention is given to non-uniformity in CAs and especially to non-uniform elementary CAs, which have been very useful in solving several real-life problems.Comment: 43 pages; Under review in Natural Computin

Infinite Networks, Halting and Local Algorithms

The immediate past has witnessed an increased amount of interest in local algorithms, i.e., constant time distributed algorithms. In a recent survey of the topic (Suomela, ACM Computing Surveys, 2013), it is argued that local algorithms provide a natural framework that could be used in order to theoretically control infinite networks in finite time. We study a comprehensive collection of distributed computing models and prove that if infinite networks are included in the class of structures investigated, then every universally halting distributed algorithm is in fact a local algorithm. To contrast this result, we show that if only finite networks are allowed, then even very weak distributed computing models can define nonlocal algorithms that halt everywhere. The investigations in this article continue the studies in the intersection of logic and distributed computing initiated in (Hella et al., PODC 2012) and (Kuusisto, CSL 2013).Comment: In Proceedings GandALF 2014, arXiv:1408.556

Cycle Equivalence of Graph Dynamical Systems

Graph dynamical systems (GDSs) can be used to describe a wide range of distributed, nonlinear phenomena. In this paper we characterize cycle equivalence of a class of finite GDSs called sequential dynamical systems SDSs. In general, two finite GDSs are cycle equivalent if their periodic orbits are isomorphic as directed graphs. Sequential dynamical systems may be thought of as generalized cellular automata, and use an update order to construct the dynamical system map. The main result of this paper is a characterization of cycle equivalence in terms of shifts and reflections of the SDS update order. We construct two graphs C(Y) and D(Y) whose components describe update orders that give rise to cycle equivalent SDSs. The number of components in C(Y) and D(Y) is an upper bound for the number of cycle equivalence classes one can obtain, and we enumerate these quantities through a recursion relation for several graph classes. The components of these graphs encode dynamical neutrality, the component sizes represent periodic orbit structural stability, and the number of components can be viewed as a system complexity measure