Convolutional Sparse Kernel Network for Unsupervised Medical Image Analysis

The availability of large-scale annotated image datasets and recent advances in supervised deep learning methods enable the end-to-end derivation of representative image features that can impact a variety of image analysis problems. Such supervised approaches, however, are difficult to implement in the medical domain where large volumes of labelled data are difficult to obtain due to the complexity of manual annotation and inter- and intra-observer variability in label assignment. We propose a new convolutional sparse kernel network (CSKN), which is a hierarchical unsupervised feature learning framework that addresses the challenge of learning representative visual features in medical image analysis domains where there is a lack of annotated training data. Our framework has three contributions: (i) We extend kernel learning to identify and represent invariant features across image sub-patches in an unsupervised manner. (ii) We initialise our kernel learning with a layer-wise pre-training scheme that leverages the sparsity inherent in medical images to extract initial discriminative features. (iii) We adapt a multi-scale spatial pyramid pooling (SPP) framework to capture subtle geometric differences between learned visual features. We evaluated our framework in medical image retrieval and classification on three public datasets. Our results show that our CSKN had better accuracy when compared to other conventional unsupervised methods and comparable accuracy to methods that used state-of-the-art supervised convolutional neural networks (CNNs). Our findings indicate that our unsupervised CSKN provides an opportunity to leverage unannotated big data in medical imaging repositories.Comment: Accepted by Medical Image Analysis (with a new title 'Convolutional Sparse Kernel Network for Unsupervised Medical Image Analysis'). The manuscript is available from following link (https://doi.org/10.1016/j.media.2019.06.005

Aggregated Deep Local Features for Remote Sensing Image Retrieval

Remote Sensing Image Retrieval remains a challenging topic due to the special nature of Remote Sensing Imagery. Such images contain various different semantic objects, which clearly complicates the retrieval task. In this paper, we present an image retrieval pipeline that uses attentive, local convolutional features and aggregates them using the Vector of Locally Aggregated Descriptors (VLAD) to produce a global descriptor. We study various system parameters such as the multiplicative and additive attention mechanisms and descriptor dimensionality. We propose a query expansion method that requires no external inputs. Experiments demonstrate that even without training, the local convolutional features and global representation outperform other systems. After system tuning, we can achieve state-of-the-art or competitive results. Furthermore, we observe that our query expansion method increases overall system performance by about 3%, using only the top-three retrieved images. Finally, we show how dimensionality reduction produces compact descriptors with increased retrieval performance and fast retrieval computation times, e.g. 50% faster than the current systems.Comment: Published in Remote Sensing. The first two authors have equal contributio

A Survey on Deep Learning in Medical Image Analysis

Deep learning algorithms, in particular convolutional networks, have rapidly become a methodology of choice for analyzing medical images. This paper reviews the major deep learning concepts pertinent to medical image analysis and summarizes over 300 contributions to the field, most of which appeared in the last year. We survey the use of deep learning for image classification, object detection, segmentation, registration, and other tasks and provide concise overviews of studies per application area. Open challenges and directions for future research are discussed.Comment: Revised survey includes expanded discussion section and reworked introductory section on common deep architectures. Added missed papers from before Feb 1st 201

Deep learning in remote sensing: a review

Standing at the paradigm shift towards data-intensive science, machine learning techniques are becoming increasingly important. In particular, as a major breakthrough in the field, deep learning has proven as an extremely powerful tool in many fields. Shall we embrace deep learning as the key to all? Or, should we resist a 'black-box' solution? There are controversial opinions in the remote sensing community. In this article, we analyze the challenges of using deep learning for remote sensing data analysis, review the recent advances, and provide resources to make deep learning in remote sensing ridiculously simple to start with. More importantly, we advocate remote sensing scientists to bring their expertise into deep learning, and use it as an implicit general model to tackle unprecedented large-scale influential challenges, such as climate change and urbanization.Comment: Accepted for publication IEEE Geoscience and Remote Sensing Magazin

Video retrieval based on deep convolutional neural network

Recently, with the enormous growth of online videos, fast video retrieval research has received increasing attention. As an extension of image hashing techniques, traditional video hashing methods mainly depend on hand-crafted features and transform the real-valued features into binary hash codes. As videos provide far more diverse and complex visual information than images, extracting features from videos is much more challenging than that from images. Therefore, high-level semantic features to represent videos are needed rather than low-level hand-crafted methods. In this paper, a deep convolutional neural network is proposed to extract high-level semantic features and a binary hash function is then integrated into this framework to achieve an end-to-end optimization. Particularly, our approach also combines triplet loss function which preserves the relative similarity and difference of videos and classification loss function as the optimization objective. Experiments have been performed on two public datasets and the results demonstrate the superiority of our proposed method compared with other state-of-the-art video retrieval methods