1,204 research outputs found
Analysis of group evolution prediction in complex networks
In the world, in which acceptance and the identification with social
communities are highly desired, the ability to predict evolution of groups over
time appears to be a vital but very complex research problem. Therefore, we
propose a new, adaptable, generic and mutli-stage method for Group Evolution
Prediction (GEP) in complex networks, that facilitates reasoning about the
future states of the recently discovered groups. The precise GEP modularity
enabled us to carry out extensive and versatile empirical studies on many
real-world complex / social networks to analyze the impact of numerous setups
and parameters like time window type and size, group detection method,
evolution chain length, prediction models, etc. Additionally, many new
predictive features reflecting the group state at a given time have been
identified and tested. Some other research problems like enriching learning
evolution chains with external data have been analyzed as well
Computing Vertex Centrality Measures in Massive Real Networks with a Neural Learning Model
Vertex centrality measures are a multi-purpose analysis tool, commonly used
in many application environments to retrieve information and unveil knowledge
from the graphs and network structural properties. However, the algorithms of
such metrics are expensive in terms of computational resources when running
real-time applications or massive real world networks. Thus, approximation
techniques have been developed and used to compute the measures in such
scenarios. In this paper, we demonstrate and analyze the use of neural network
learning algorithms to tackle such task and compare their performance in terms
of solution quality and computation time with other techniques from the
literature. Our work offers several contributions. We highlight both the pros
and cons of approximating centralities though neural learning. By empirical
means and statistics, we then show that the regression model generated with a
feedforward neural networks trained by the Levenberg-Marquardt algorithm is not
only the best option considering computational resources, but also achieves the
best solution quality for relevant applications and large-scale networks.
Keywords: Vertex Centrality Measures, Neural Networks, Complex Network Models,
Machine Learning, Regression ModelComment: 8 pages, 5 tables, 2 figures, version accepted at IJCNN 2018. arXiv
admin note: text overlap with arXiv:1810.1176
A branch-and-cut approach to physical mapping with end-probes
A fundamental problem in computational biology is the construction of physical maps of chromosomes from hybridization experiments between unique probes and clones of chromosome fragments in the presence of error. Alizadeh, Karp, Weisser and Zweig (Algorithmica 13:1/2, 52-76, 1995) first considered a maximum-likelihood model of the problem that is equivalent to finding an ordering of the probes that minimizes a weighted sum of errors, and developed several effective heuristics. We show that by exploiting information about the end-probes of clones, this model can be formulated as a weighted Betweenness Problem. This affords the significant advantage of allowing the well-developed tools of integer linear-programming and branch-and-cut algorithms to be brought to bear on physical mapping, enabling us for the first time to solve small mapping instances to optimality even in the presence of high error. We also show that by combining the optimal solution of many small overlapping Betweenness Problems, one can effectively screen errors from larger instances, and solve the edited instance to optimality as a Hamming-Distance Traveling Salesman Problem. This suggests a new combined approach to physical map construction
Dynamic communities in multichannel data: An application to the foreign exchange market during the 2007--2008 credit crisis
We study the cluster dynamics of multichannel (multivariate) time series by
representing their correlations as time-dependent networks and investigating
the evolution of network communities. We employ a node-centric approach that
allows us to track the effects of the community evolution on the functional
roles of individual nodes without having to track entire communities. As an
example, we consider a foreign exchange market network in which each node
represents an exchange rate and each edge represents a time-dependent
correlation between the rates. We study the period 2005-2008, which includes
the recent credit and liquidity crisis. Using dynamical community detection, we
find that exchange rates that are strongly attached to their community are
persistently grouped with the same set of rates, whereas exchange rates that
are important for the transfer of information tend to be positioned on the
edges of communities. Our analysis successfully uncovers major trading changes
that occurred in the market during the credit crisis.Comment: 8 pages, 6 figures, accepted for publication in Chao
Learning Reputation in an Authorship Network
The problem of searching for experts in a given academic field is hugely
important in both industry and academia. We study exactly this issue with
respect to a database of authors and their publications. The idea is to use
Latent Semantic Indexing (LSI) and Latent Dirichlet Allocation (LDA) to perform
topic modelling in order to find authors who have worked in a query field. We
then construct a coauthorship graph and motivate the use of influence
maximisation and a variety of graph centrality measures to obtain a ranked list
of experts. The ranked lists are further improved using a Markov Chain-based
rank aggregation approach. The complete method is readily scalable to large
datasets. To demonstrate the efficacy of the approach we report on an extensive
set of computational simulations using the Arnetminer dataset. An improvement
in mean average precision is demonstrated over the baseline case of simply
using the order of authors found by the topic models
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