Effective Theories for Circuits and Automata

Abstracting an effective theory from a complicated process is central to the study of complexity. Even when the underlying mechanisms are understood, or at least measurable, the presence of dissipation and irreversibility in biological, computational and social systems makes the problem harder. Here we demonstrate the construction of effective theories in the presence of both irreversibility and noise, in a dynamical model with underlying feedback. We use the Krohn-Rhodes theorem to show how the composition of underlying mechanisms can lead to innovations in the emergent effective theory. We show how dissipation and irreversibility fundamentally limit the lifetimes of these emergent structures, even though, on short timescales, the group properties may be enriched compared to their noiseless counterparts.Comment: 11 pages, 9 figure

Automaton Semigroups and Groups: On the Undecidability of Problems Related to Freeness and Finiteness

In this paper, we study algorithmic problems for automaton semigroups and automaton groups related to freeness and finiteness. In the course of this study, we also exhibit some connections between the algebraic structure of automaton (semi)groups and their dynamics on the boundary. First, we show that it is undecidable to check whether the group generated by a given invertible automaton has a positive relation, i.e. a relation p = 1 such that p only contains positive generators. Besides its obvious relation to the freeness of the group, the absence of positive relations has previously been studied and is connected to the triviality of some stabilizers of the boundary. We show that the emptiness of the set of positive relations is equivalent to the dynamical property that all (directed positive) orbital graphs centered at non-singular points are acyclic. Gillibert showed that the finiteness problem for automaton semigroups is undecidable. In the second part of the paper, we show that this undecidability result also holds if the input is restricted to be bi-reversible and invertible (but, in general, not complete). As an immediate consequence, we obtain that the finiteness problem for automaton subsemigroups of semigroups generated by invertible, yet partial automata, so called automaton-inverse semigroups, is also undecidable. Erratum: Contrary to a statement in a previous version of the paper, our approach does not show that that the freeness problem for automaton semigroups is undecidable. We discuss this in an erratum at the end of the paper

The Algebraic View of Computation

We argue that computation is an abstract algebraic concept, and a computer is a result of a morphism (a structure preserving map) from a finite universal semigroup.Comment: 13 pages, final version will be published elsewher

On the Complexity of the Word Problem for Automaton Semigroups and Automaton Groups

In this paper, we study the word problem for automaton semigroups and automaton groups from a complexity point of view. As an intermediate concept between automaton semigroups and automaton groups, we introduce automaton-inverse semigroups, which are generated by partial, yet invertible automata. We show that there is an automaton-inverse semigroup and, thus, an automaton semigroup with a PSPACE-complete word problem. We also show that there is an automaton group for which the word problem with a single rational constraint is PSPACE-complete. Additionally, we provide simpler constructions for the uniform word problems of these classes. For the uniform word problem for automaton groups (without rational constraints), we show NL-hardness. Finally, we investigate a question asked by Cain about a better upper bound for the length of a word on which two distinct elements of an automaton semigroup must act differently

Self-Automaton Semigroups

After reviewing automaton semigroups, we introduce Cayley Automata and the corresponding Cayley Automaton semigroups. We investigate which semigroups are isomorphic to their Cayley Automaton semigroup and give some results for special classes of semigroups. We answer a question posed by Cain relating to the dual construction.Comment: 18 page

Exploring the concept of interaction computing through the discrete algebraic analysis of the Belousov–Zhabotinsky reaction

Interaction computing (IC) aims to map the properties of integrable low-dimensional non-linear dynamical systems to the discrete domain of finite-state automata in an attempt to reproduce in software the self-organizing and dynamically stable properties of sub-cellular biochemical systems. As the work reported in this paper is still at the early stages of theory development it focuses on the analysis of a particularly simple chemical oscillator, the Belousov-Zhabotinsky (BZ) reaction. After retracing the rationale for IC developed over the past several years from the physical, biological, mathematical, and computer science points of view, the paper presents an elementary discussion of the Krohn-Rhodes decomposition of finite-state automata, including the holonomy decomposition of a simple automaton, and of its interpretation as an abstract positional number system. The method is then applied to the analysis of the algebraic properties of discrete finite-state automata derived from a simplified Petri net model of the BZ reaction. In the simplest possible and symmetrical case the corresponding automaton is, not surprisingly, found to contain exclusively cyclic groups. In a second, asymmetrical case, the decomposition is much more complex and includes five different simple non-abelian groups whose potential relevance arises from their ability to encode functionally complete algebras. The possible computational relevance of these findings is discussed and possible conclusions are drawn

Regular Cost Functions, Part I: Logic and Algebra over Words

The theory of regular cost functions is a quantitative extension to the classical notion of regularity. A cost function associates to each input a non-negative integer value (or infinity), as opposed to languages which only associate to each input the two values "inside" and "outside". This theory is a continuation of the works on distance automata and similar models. These models of automata have been successfully used for solving the star-height problem, the finite power property, the finite substitution problem, the relative inclusion star-height problem and the boundedness problem for monadic-second order logic over words. Our notion of regularity can be -- as in the classical theory of regular languages -- equivalently defined in terms of automata, expressions, algebraic recognisability, and by a variant of the monadic second-order logic. These equivalences are strict extensions of the corresponding classical results. The present paper introduces the cost monadic logic, the quantitative extension to the notion of monadic second-order logic we use, and show that some problems of existence of bounds are decidable for this logic. This is achieved by introducing the corresponding algebraic formalism: stabilisation monoids.Comment: 47 page

Logic Meets Algebra: the Case of Regular Languages

The study of finite automata and regular languages is a privileged meeting point of algebra and logic. Since the work of Buchi, regular languages have been classified according to their descriptive complexity, i.e. the type of logical formalism required to define them. The algebraic point of view on automata is an essential complement of this classification: by providing alternative, algebraic characterizations for the classes, it often yields the only opportunity for the design of algorithms that decide expressibility in some logical fragment. We survey the existing results relating the expressibility of regular languages in logical fragments of MSO[S] with algebraic properties of their minimal automata. In particular, we show that many of the best known results in this area share the same underlying mechanics and rely on a very strong relation between logical substitutions and block-products of pseudovarieties of monoid. We also explain the impact of these connections on circuit complexity theory.Comment: 37 page