Distributed Holistic Clustering on Linked Data

Link discovery is an active field of research to support data integration in the Web of Data. Due to the huge size and number of available data sources, efficient and effective link discovery is a very challenging task. Common pairwise link discovery approaches do not scale to many sources with very large entity sets. We here propose a distributed holistic approach to link many data sources based on a clustering of entities that represent the same real-world object. Our clustering approach provides a compact and fused representation of entities, and can identify errors in existing links as well as many new links. We support a distributed execution of the clustering approach to achieve faster execution times and scalability for large real-world data sets. We provide a novel gold standard for multi-source clustering, and evaluate our methods with respect to effectiveness and efficiency for large data sets from the geographic and music domains

Human-Centric Cyber Social Computing Model for Hot-Event Detection and Propagation

The file attached to this record is the author's final peer reviewed version. The Publisher's final version can be found by following the DOI link.Microblogging networks have gained popularity in recent years as a platform enabling expressions of human emotions, through which users can conveniently produce contents on public events, breaking news, and/or products. Subsequently, microblogging networks generate massive amounts of data that carry opinions and mass sentiment on various topics. Herein, microblogging is regarded as a useful platform for detecting and propagating new hot events. It is also a useful channel for identifying high-quality posts, popular topics, key interests, and high-influence users. The existence of noisy data in the traditional social media data streams enforces to focus on human-centric computing. This paper proposes a human-centric social computing (HCSC) model for hot-event detection and propagation in microblogging networks. In the proposed HCSC model, all posts and users are preprocessed through hypertext induced topic search (HITS) for determining high-quality subsets of the users, topics, and posts. Then, a latent Dirichlet allocation (LDA)-based multiprototype user topic detection method is used for identifying users with high influence in the network. Furthermore, an influence maximization is used for final determination of influential users based on the user subsets. Finally, the users mined by influence maximization process are generated as the influential user sets for specific topics. Experimental results prove the superiority of our HCSC model against similar models of hot-event detection and information propagation

Machine Learning and Integrative Analysis of Biomedical Big Data.

Recent developments in high-throughput technologies have accelerated the accumulation of massive amounts of omics data from multiple sources: genome, epigenome, transcriptome, proteome, metabolome, etc. Traditionally, data from each source (e.g., genome) is analyzed in isolation using statistical and machine learning (ML) methods. Integrative analysis of multi-omics and clinical data is key to new biomedical discoveries and advancements in precision medicine. However, data integration poses new computational challenges as well as exacerbates the ones associated with single-omics studies. Specialized computational approaches are required to effectively and efficiently perform integrative analysis of biomedical data acquired from diverse modalities. In this review, we discuss state-of-the-art ML-based approaches for tackling five specific computational challenges associated with integrative analysis: curse of dimensionality, data heterogeneity, missing data, class imbalance and scalability issues

Multiple Relevant Feature Ensemble Selection Based on Multilayer Co-Evolutionary Consensus MapReduce

IEEE Although feature selection for large data has been intensively investigated in data mining, machine learning, and pattern recognition, the challenges are not just to invent new algorithms to handle noisy and uncertain large data in applications, but rather to link the multiple relevant feature sources, structured, or unstructured, to develop an effective feature reduction method. In this paper, we propose a multiple relevant feature ensemble selection (MRFES) algorithm based on multilayer co-evolutionary consensus MapReduce (MCCM). We construct an effective MCCM model to handle feature ensemble selection of large-scale datasets with multiple relevant feature sources, and explore the unified consistency aggregation between the local solutions and global dominance solutions achieved by the co-evolutionary memeplexes, which participate in the cooperative feature ensemble selection process. This model attempts to reach a mutual decision agreement among co-evolutionary memeplexes, which calls for the need for mechanisms to detect some noncooperative co-evolutionary behaviors and achieve better Nash equilibrium resolutions. Extensive experimental comparative studies substantiate the effectiveness of MRFES to solve large-scale dataset problems with the complex noise and multiple relevant feature sources on some well-known benchmark datasets. The algorithm can greatly facilitate the selection of relevant feature subsets coming from the original feature space with better accuracy, efficiency, and interpretability. Moreover, we apply MRFES to human cerebral cortex-based classification prediction. Such successful applications are expected to significantly scale up classification prediction for large-scale and complex brain data in terms of efficiency and feasibility

Truss Decomposition in Massive Networks

The k-truss is a type of cohesive subgraphs proposed recently for the study of networks. While the problem of computing most cohesive subgraphs is NP-hard, there exists a polynomial time algorithm for computing k-truss. Compared with k-core which is also efficient to compute, k-truss represents the "core" of a k-core that keeps the key information of, while filtering out less important information from, the k-core. However, existing algorithms for computing k-truss are inefficient for handling today's massive networks. We first improve the existing in-memory algorithm for computing k-truss in networks of moderate size. Then, we propose two I/O-efficient algorithms to handle massive networks that cannot fit in main memory. Our experiments on real datasets verify the efficiency of our algorithms and the value of k-truss.Comment: VLDB201