4,186 research outputs found

    Extending the Abstract Data Model.

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    The Abstract Data Model (ADM) was developed by Sanderson [19] to model and predict semantic loss in data translation between computer languages. In this work, the ADM was applied to eight languages that were not considered as part of the original work. Some of the languages were found to support semantic features, such as the restriction semantics for inheritance found in languages like XML Schemas and Java, which could not be represented in the ADM. A proposal was made to extend the ADM to support these semantic features, and the requirements and implications of implementing that proposal were considered

    SNOMED CT standard ontology based on the ontology for general medical science

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    Background: Systematized Nomenclature of Medicine—Clinical Terms (SNOMED CT, hereafter abbreviated SCT) is acomprehensive medical terminology used for standardizing the storage, retrieval, and exchange of electronic healthdata. Some efforts have been made to capture the contents of SCT as Web Ontology Language (OWL), but theseefforts have been hampered by the size and complexity of SCT. Method: Our proposal here is to develop an upper-level ontology and to use it as the basis for defining the termsin SCT in a way that will support quality assurance of SCT, for example, by allowing consistency checks ofdefinitions and the identification and elimination of redundancies in the SCT vocabulary. Our proposed upper-levelSCT ontology (SCTO) is based on the Ontology for General Medical Science (OGMS). Results: The SCTO is implemented in OWL 2, to support automatic inference and consistency checking. Theapproach will allow integration of SCT data with data annotated using Open Biomedical Ontologies (OBO) Foundryontologies, since the use of OGMS will ensure consistency with the Basic Formal Ontology, which is the top-levelontology of the OBO Foundry. Currently, the SCTO contains 304 classes, 28 properties, 2400 axioms, and 1555annotations. It is publicly available through the bioportal athttp://bioportal.bioontology.org/ontologies/SCTO/. Conclusion: The resulting ontology can enhance the semantics of clinical decision support systems and semanticinteroperability among distributed electronic health records. In addition, the populated ontology can be used forthe automation of mobile health applications

    Evolving Objects in Temporal Information Systems

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    This paper presents a semantic foundation of temporal conceptual models used to design temporal information systems. We consider a modelling language able to express both timestamping and evolution constraints. We conduct a deeper investigation of evolution constraints, eventually devising a model-theoretic semantics for a full-fledged model with both timestamping and evolution constraints. The proposed formalization is meant both to clarify the meaning of the various temporal constructors that appeared in the literature and to give a rigorous definition, in the context of temporal information systems, to notions like satisfiability, subsumption and logical implication. Furthermore, we show how to express temporal constraints using a subset of first-order temporal logic, i.e. DLRUS, the description logic DLR extended with the temporal operators Since and Until. We show how DLRUS is able to capture the various modelling constraints in a succinct way and to perform automated reasoning on temporal conceptual models
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