384 research outputs found

    Multi-language transfer learning for low-resource legal case summarization

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    Analyzing and evaluating legal case reports are labor-intensive tasks for judges and lawyers, who usually base their decisions on report abstracts, legal principles, and commonsense reasoning. Thus, summarizing legal documents is time-consuming and requires excellent human expertise. Moreover, public legal corpora of specific languages are almost unavailable. This paper proposes a transfer learning approach with extractive and abstractive techniques to cope with the lack of labeled legal summarization datasets, namely a low-resource scenario. In particular, we conducted extensive multi- and cross-language experiments. The proposed work outperforms the state-of-the-art results of extractive summarization on the Australian Legal Case Reports dataset and sets a new baseline for abstractive summarization. Finally, syntactic and semantic metrics assessments have been carried out to evaluate the accuracy and the factual consistency of the machine-generated legal summaries

    A Survey on Biomedical Text Summarization with Pre-trained Language Model

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    The exponential growth of biomedical texts such as biomedical literature and electronic health records (EHRs), provides a big challenge for clinicians and researchers to access clinical information efficiently. To address the problem, biomedical text summarization has been proposed to support clinical information retrieval and management, aiming at generating concise summaries that distill key information from single or multiple biomedical documents. In recent years, pre-trained language models (PLMs) have been the de facto standard of various natural language processing tasks in the general domain. Most recently, PLMs have been further investigated in the biomedical field and brought new insights into the biomedical text summarization task. In this paper, we systematically summarize recent advances that explore PLMs for biomedical text summarization, to help understand recent progress, challenges, and future directions. We categorize PLMs-based approaches according to how they utilize PLMs and what PLMs they use. We then review available datasets, recent approaches and evaluation metrics of the task. We finally discuss existing challenges and promising future directions. To facilitate the research community, we line up open resources including available datasets, recent approaches, codes, evaluation metrics, and the leaderboard in a public project: https://github.com/KenZLuo/Biomedical-Text-Summarization-Survey/tree/master.Comment: 19 pages, 6 figures, TKDE under revie

    Neural Representations of Concepts and Texts for Biomedical Information Retrieval

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    Information retrieval (IR) methods are an indispensable tool in the current landscape of exponentially increasing textual data, especially on the Web. A typical IR task involves fetching and ranking a set of documents (from a large corpus) in terms of relevance to a user\u27s query, which is often expressed as a short phrase. IR methods are the backbone of modern search engines where additional system-level aspects including fault tolerance, scale, user interfaces, and session maintenance are also addressed. In addition to fetching documents, modern search systems may also identify snippets within the documents that are potentially most relevant to the input query. Furthermore, current systems may also maintain preprocessed structured knowledge derived from textual data as so called knowledge graphs, so certain types of queries that are posed as questions can be parsed as such; a response can be an output of one or more named entities instead of a ranked list of documents (e.g., what diseases are associated with EGFR mutations? ). This refined setup is often termed as question answering (QA) in the IR and natural language processing (NLP) communities. In biomedicine and healthcare, specialized corpora are often at play including research articles by scientists, clinical notes generated by healthcare professionals, consumer forums for specific conditions (e.g., cancer survivors network), and clinical trial protocols (e.g., www.clinicaltrials.gov). Biomedical IR is specialized given the types of queries and the variations in the texts are different from that of general Web documents. For example, scientific articles are more formal with longer sentences but clinical notes tend to have less grammatical conformity and are rife with abbreviations. There is also a mismatch between the vocabulary of consumers and the lingo of domain experts and professionals. Queries are also different and can range from simple phrases (e.g., COVID-19 symptoms ) to more complex implicitly fielded queries (e.g., chemotherapy regimens for stage IV lung cancer patients with ALK mutations ). Hence, developing methods for different configurations (corpus, query type, user type) needs more deliberate attention in biomedical IR. Representations of documents and queries are at the core of IR methods and retrieval methodology involves coming up with these representations and matching queries with documents based on them. Traditional IR systems follow the approach of keyword based indexing of documents (the so called inverted index) and matching query phrases against the document index. It is not difficult to see that this keyword based matching ignores the semantics of texts (synonymy at the lexeme level and entailment at phrase/clause/sentence levels) and this has lead to dimensionality reduction methods such as latent semantic indexing that generally have scale-related concerns; such methods also do not address similarity at the sentence level. Since the resurgence of neural network methods in NLP, the IR field has also moved to incorporate advances in neural networks into current IR methods. This dissertation presents four specific methodological efforts toward improving biomedical IR. Neural methods always begin with dense embeddings for words and concepts to overcome the limitations of one-hot encoding in traditional NLP/IR. In the first effort, we present a new neural pre-training approach to jointly learn word and concept embeddings for downstream use in applications. In the second study, we present a joint neural model for two essential subtasks of information extraction (IE): named entity recognition (NER) and entity normalization (EN). Our method detects biomedical concept phrases in texts and links them to the corresponding semantic types and entity codes. These first two studies provide essential tools to model textual representations as compositions of both surface forms (lexical units) and high level concepts with potential downstream use in QA. In the third effort, we present a document reranking model that can help surface documents that are likely to contain answers (e.g, factoids, lists) to a question in a QA task. The model is essentially a sentence matching neural network that learns the relevance of a candidate answer sentence to the given question parametrized with a bilinear map. In the fourth effort, we present another document reranking approach that is tailored for precision medicine use-cases. It combines neural query-document matching and faceted text summarization. The main distinction of this effort from previous efforts is to pivot from a query manipulation setup to transforming candidate documents into pseudo-queries via neural text summarization. Overall, our contributions constitute nontrivial advances in biomedical IR using neural representations of concepts and texts

    Automatic text summarization of konkani texts using pre-trained word embeddings and deep learning

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    Automatic text summarization has gained immense popularity in research. Previously, several methods have been explored for obtaining effective text summarization outcomes. However, most of the work pertains to the most popular languages spoken in the world. Through this paper, we explore the area of extractive automatic text summarization using deep learning approach and apply it to Konkani language, which is a low-resource language as there are limited resources, such as data, tools, speakers and/or experts in Konkani. In the proposed technique, Facebook’s fastText pre-trained word embeddings are used to get a vector representation for sentences. Thereafter, deep multi-layer perceptron technique is employed, as a supervised binary classification task for auto-generating summaries using the feature vectors. Using pre-trained fastText word embeddings eliminated the requirement of a large training set and reduced training time. The system generated summaries were evaluated against the ‘gold-standard’ human generated summaries with recall-oriented understudy for gisting evaluation (ROUGE) toolkit. The results thus obtained showed that performance of the proposed system matched closely to the performance of the human annotators in generating summaries
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