Characterising the ocean frontier : a review of marine geomorphometry

Geomorphometry, the science that quantitatively describes terrains, has traditionally focused on the investigation of terrestrial landscapes. However, the dramatic increase in the availability of digital bathymetric data and the increasing ease by which geomorphometry can be investigated using Geographic Information Systems (GIS) has prompted interest in employing geomorphometric techniques to investigate the marine environment. Over the last decade, a suite of geomorphometric techniques have been applied (e.g. terrain attributes, feature extraction, automated classification) to investigate the characterisation of seabed terrain from the coastal zone to the deep sea. Geomorphometric techniques are, however, not as varied, nor as extensively applied, in marine as they are in terrestrial environments. This is at least partly due to difficulties associated with capturing, classifying, and validating terrain characteristics underwater. There is nevertheless much common ground between terrestrial and marine geomorphology applications and it is important that, in developing the science and application of marine geomorphometry, we build on the lessons learned from terrestrial studies. We note, however, that not all terrestrial solutions can be adopted by marine geomorphometric studies since the dynamic, four- dimensional nature of the marine environment causes its own issues, boosting the need for a dedicated scientific effort in marine geomorphometry. This contribution offers the first comprehensive review of marine geomorphometry to date. It addresses all the five main steps of geomorphometry, from data collection to the application of terrain attributes and features. We focus on how these steps are relevant to marine geomorphometry and also highlight differences from terrestrial geomorphometry. We conclude with recommendations and reflections on the future of marine geomorphometry.peer-reviewe

A review of marine geomorphometry, the quantitative study of the seafloor

Geomorphometry, the science of quantitative terrain characterization, has traditionally focused on the investigation of terrestrial landscapes. However, the dramatic increase in the availability of digital bathymetric data and the increasing ease by which geomorphometry can be investigated using geographic information systems (GISs) and spatial analysis software has prompted interest in employing geomorphometric techniques to investigate the marine environment. Over the last decade or so, a multitude of geomorphometric techniques (e.g. terrain attributes, feature extraction, automated classification) have been applied to characterize seabed terrain from the coastal zone to the deep sea. Geomorphometric techniques are, however, not as varied, nor as extensively applied, in marine as they are in terrestrial environments. This is at least partly due to difficulties associated with capturing, classifying, and validating terrain characteristics underwater. There is, nevertheless, much common ground between terrestrial and marine geomorphometry applications and it is important that, in developing marine geomorphometry, we learn from experiences in terrestrial studies. However, not all terrestrial solutions can be adopted by marine geomorphometric studies since the dynamic, four-dimensional (4-D) nature of the marine environment causes its own issues throughout the geomorphometry workflow. For instance, issues with underwater positioning, variations in sound velocity in the water column affecting acousticbased mapping, and our inability to directly observe and measure depth and morphological features on the seafloor are all issues specific to the application of geomorphometry in the marine environment. Such issues fuel the need for a dedicated scientific effort in marine geomorphometry. This review aims to highlight the relatively recent growth of marine geomorphometry as a distinct discipline, and offers the first comprehensive overview of marine geomorphometry to date. We address all the five main steps of geomorphometry, from data collection to the application of terrain attributes and features. We focus on how these steps are relevant to marine geomorphometry and also highlight differences and similarities from terrestrial geomorphometry. We conclude with recommendations and reflections on the future of marine geomorphometry. To ensure that geomorphometry is used and developed to its full potential, there is a need to increase awareness of (1) marine geomorphometry amongst scientists already engaged in terrestrial geomorphometry, and of (2) geomorphometry as a science amongst marine scientists with a wide range of backgrounds and experiences.peer-reviewe

Fly Safe: Aerial Swarm Robotics using Force Field Particle Swarm Optimisation

This project proposes a solution to the problem of maintaining the infrastructure of bridges and otherstructures. New designs and technologies allow bridges to be built higher, reach longer, and span ariver, valley or sea that were deemed impossible to cross before. This creates hazardous environmentsthat are hard for humans to reach, making the labour intensive inspection and maintenance processineffective. Such hazardous inspection and maintenance environments are not limited to bridges andexist across all forms of critical infrastructure. However, this task may have the potential to be done byautonomous systems. In this project we aim to create a coordinated aerial swarm system to inspect thecracks in the bridge structures, improving the monitoring coverage and efficiency. With strict constraintsof the environments and mutual interference, the development of such multi-UAV system for bridgeinspection is challenging. We have achieved the following objectives of the project: Agile coordinationand collision avoidance for aerial swarms (WP1); Image based bridge defect detection and assessment(WP2); System integration and validation (WP3

Using contour information and segmentation for object registration, modeling and retrieval

This thesis considers different aspects of the utilization of contour information and syntactic and semantic image segmentation for object registration, modeling and retrieval in the context of content-based indexing and retrieval in large collections of images. Target applications include retrieval in collections of closed silhouettes, holistic w ord recognition in handwritten historical manuscripts and shape registration. Also, the thesis explores the feasibility of contour-based syntactic features for improving the correspondence of the output of bottom-up segmentation to semantic objects present in the scene and discusses the feasibility of different strategies for image analysis utilizing contour information, e.g. segmentation driven by visual features versus segmentation driven by shape models or semi-automatic in selected application scenarios. There are three contributions in this thesis. The first contribution considers structure analysis based on the shape and spatial configuration of image regions (socalled syntactic visual features) and their utilization for automatic image segmentation. The second contribution is the study of novel shape features, matching algorithms and similarity measures. Various applications of the proposed solutions are presented throughout the thesis providing the basis for the third contribution which is a discussion of the feasibility of different recognition strategies utilizing contour information. In each case, the performance and generality of the proposed approach has been analyzed based on extensive rigorous experimentation using as large as possible test collections

Instructor\u27s Guide to Concepts of Biology, Chapters 12-21

Authors\u27 Description: This Instructor’s Guide contains the brief outlines of Chapters 12-21 as found in Concepts of Biology, though some underwent revision. Also, instructors will find detailed outlines of the text for use in lecturing, as well as structured outlines that may be used by students to take notes while reading the chapter or during lecture. All outlines are derived from the OpenStax text. Additionally, study guides that contain a variety of questions are provided for students. The appendices contain Web resources where additional information can be found about the topics covered in the text; these Web resources may or may not be open resources, and copyright information is included in the appendix, but it is incumbent upon the instructor to ensure fair use. Teaching Tips are included to promote active learning and student engagement. A sample calendar is provided to illustrate the structure of the course. A link to Sara Selby’s “Virtual Tour of the Okefenokee Swamp,” which is licensed through Creative Commons, is included, or, if the iBooks version of this guide is used, the tour itself is included. All photographs in this guide are by Sara Selby, and all graphics are provided by PresenterMedia.com. Accessible files with optical character recognition (OCR) and auto-tagging provided by the Center for Inclusive Design and Innovation.https://oer.galileo.usg.edu/biology-textbooks/1000/thumbnail.jp

Computational Pathology: A Survey Review and The Way Forward

Computational Pathology CPath is an interdisciplinary science that augments developments of computational approaches to analyze and model medical histopathology images. The main objective for CPath is to develop infrastructure and workflows of digital diagnostics as an assistive CAD system for clinical pathology, facilitating transformational changes in the diagnosis and treatment of cancer that are mainly address by CPath tools. With evergrowing developments in deep learning and computer vision algorithms, and the ease of the data flow from digital pathology, currently CPath is witnessing a paradigm shift. Despite the sheer volume of engineering and scientific works being introduced for cancer image analysis, there is still a considerable gap of adopting and integrating these algorithms in clinical practice. This raises a significant question regarding the direction and trends that are undertaken in CPath. In this article we provide a comprehensive review of more than 800 papers to address the challenges faced in problem design all-the-way to the application and implementation viewpoints. We have catalogued each paper into a model-card by examining the key works and challenges faced to layout the current landscape in CPath. We hope this helps the community to locate relevant works and facilitate understanding of the field's future directions. In a nutshell, we oversee the CPath developments in cycle of stages which are required to be cohesively linked together to address the challenges associated with such multidisciplinary science. We overview this cycle from different perspectives of data-centric, model-centric, and application-centric problems. We finally sketch remaining challenges and provide directions for future technical developments and clinical integration of CPath (https://github.com/AtlasAnalyticsLab/CPath_Survey).Comment: Accepted in Elsevier Journal of Pathology Informatics (JPI) 202