High-Throughput System for the Early Quantification of Major Architectural Traits in Olive Breeding Trials Using UAV Images and OBIA Techniques

The need for the olive farm modernization have encouraged the research of more efficient crop management strategies through cross-breeding programs to release new olive cultivars more suitable for mechanization and use in intensive orchards, with high quality production and resistance to biotic and abiotic stresses. The advancement of breeding programs are hampered by the lack of efficient phenotyping methods to quickly and accurately acquire crop traits such as morphological attributes (tree vigor and vegetative growth habits), which are key to identify desirable genotypes as early as possible. In this context, an UAV-based high-throughput system for olive breeding program applications was developed to extract tree traits in large-scale phenotyping studies under field conditions. The system consisted of UAV-flight configurations, in terms of flight altitude and image overlaps, and a novel, automatic, and accurate object-based image analysis (OBIA) algorithm based on point clouds, which was evaluated in two experimental trials in the framework of a table olive breeding program, with the aim to determine the earliest date for suitable quantifying of tree architectural traits. Two training systems (intensive and hedgerow) were evaluated at two very early stages of tree growth: 15 and 27 months after planting. Digital Terrain Models (DTMs) were automatically and accurately generated by the algorithm as well as every olive tree identified, independently of the training system and tree age. The architectural traits, specially tree height and crown area, were estimated with high accuracy in the second flight campaign, i.e. 27 months after planting. Differences in the quality of 3D crown reconstruction were found for the growth patterns derived from each training system. These key phenotyping traits could be used in several olive breeding programs, as well as to address some agronomical goals. In addition, this system is cost and time optimized, so that requested architectural traits could be provided in the same day as UAV flights. This high-throughput system may solve the actual bottleneck of plant phenotyping of "linking genotype and phenotype," considered a major challenge for crop research in the 21st century, and bring forward the crucial time of decision making for breeders

Structured Light-Based 3D Reconstruction System for Plants.

Camera-based 3D reconstruction of physical objects is one of the most popular computer vision trends in recent years. Many systems have been built to model different real-world subjects, but there is lack of a completely robust system for plants. This paper presents a full 3D reconstruction system that incorporates both hardware structures (including the proposed structured light system to enhance textures on object surfaces) and software algorithms (including the proposed 3D point cloud registration and plant feature measurement). This paper demonstrates the ability to produce 3D models of whole plants created from multiple pairs of stereo images taken at different viewing angles, without the need to destructively cut away any parts of a plant. The ability to accurately predict phenotyping features, such as the number of leaves, plant height, leaf size and internode distances, is also demonstrated. Experimental results show that, for plants having a range of leaf sizes and a distance between leaves appropriate for the hardware design, the algorithms successfully predict phenotyping features in the target crops, with a recall of 0.97 and a precision of 0.89 for leaf detection and less than a 13-mm error for plant size, leaf size and internode distance

Monitoring spatial sustainable development: Semi-automated analysis of satellite and aerial images for energy transition and sustainability indicators

Solar panels are installed by a large and growing number of households due to the convenience of having cheap and renewable energy to power house appliances. In contrast to other energy sources solar installations are distributed very decentralized and spread over hundred-thousands of locations. On a global level more than 25% of solar photovoltaic (PV) installations were decentralized. The effect of the quick energy transition from a carbon based economy to a green economy is though still very difficult to quantify. As a matter of fact the quick adoption of solar panels by households is difficult to track, with local registries that miss a large number of the newly built solar panels. This makes the task of assessing the impact of renewable energies an impossible task. Although models of the output of a region exist, they are often black box estimations. This project's aim is twofold: First automate the process to extract the location of solar panels from aerial or satellite images and second, produce a map of solar panels along with statistics on the number of solar panels. Further, this project takes place in a wider framework which investigates how official statistics can benefit from new digital data sources. At project completion, a method for detecting solar panels from aerial images via machine learning will be developed and the methodology initially developed for BE, DE and NL will be standardized for application to other EU countries. In practice, machine learning techniques are used to identify solar panels in satellite and aerial images for the province of Limburg (NL), Flanders (BE) and North Rhine-Westphalia (DE).Comment: This document provides the reader with an overview of the various datasets which will be used throughout the project. The collection of satellite and aerial images as well as auxiliary information such as the location of buildings and roofs which is required to train, test and validate the machine learning algorithm that is being develope