Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode

Background: Hematoxylin & Eosin (H&E) is a widely employed technique in pathology and histology to distinguish nuclei and cytoplasm in tissues by staining them in different colors. This procedure helps to ease the diagnosis by enhancing contrast through digital microscopes. However, microscopic digital images obtained from this technique usually suffer from uneven lighting, i.e. poor Koehler illumination. Several off-the-shelf methods particularly established to correct this problem along with some popular general commercial tools have been examined to find out a robust solution. Methods: First, the characteristics of uneven lighting in pathological images obtained from the H&E technique are revealed, and then how the quality of these images can be improved by employing bilinear interpolation based approach applied on the channels of Lab color mode is explored without losing any essential detail, especially for the color information of nuclei (hematoxylin stained sections). Second, an approach to enhance the nuclei details that are a fundamental part of diagnosis and crucially needed by the pathologists who work with digital images is demonstrated. Results: Merits of the proposed methodology are substantiated on sample microscopic images. The results show that the proposed methodology not only remedies the deficiencies of H&E microscopical images, but also enhances delicate details. Conclusions: Non-uniform illumination problems in H&E microscopical images can be corrected without compromising crucial details that are essential for revealing the features of tissue samples

Joint segmentation and classification of retinal arteries/veins from fundus images

Objective Automatic artery/vein (A/V) segmentation from fundus images is required to track blood vessel changes occurring with many pathologies including retinopathy and cardiovascular pathologies. One of the clinical measures that quantifies vessel changes is the arterio-venous ratio (AVR) which represents the ratio between artery and vein diameters. This measure significantly depends on the accuracy of vessel segmentation and classification into arteries and veins. This paper proposes a fast, novel method for semantic A/V segmentation combining deep learning and graph propagation. Methods A convolutional neural network (CNN) is proposed to jointly segment and classify vessels into arteries and veins. The initial CNN labeling is propagated through a graph representation of the retinal vasculature, whose nodes are defined as the vessel branches and edges are weighted by the cost of linking pairs of branches. To efficiently propagate the labels, the graph is simplified into its minimum spanning tree. Results The method achieves an accuracy of 94.8% for vessels segmentation. The A/V classification achieves a specificity of 92.9% with a sensitivity of 93.7% on the CT-DRIVE database compared to the state-of-the-art-specificity and sensitivity, both of 91.7%. Conclusion The results show that our method outperforms the leading previous works on a public dataset for A/V classification and is by far the fastest. Significance The proposed global AVR calculated on the whole fundus image using our automatic A/V segmentation method can better track vessel changes associated to diabetic retinopathy than the standard local AVR calculated only around the optic disc.Comment: Preprint accepted in Artificial Intelligence in Medicin

A Neuromorphic Model for Achromatic and Chromatic Surface Representation of Natural Images

This study develops a neuromorphic model of human lightness perception that is inspired by how the mammalian visual system is designed for this function. It is known that biological visual representations can adapt to a billion-fold change in luminance. How such a system determines absolute lightness under varying illumination conditions to generate a consistent interpretation of surface lightness remains an unsolved problem. Such a process, called "anchoring" of lightness, has properties including articulation, insulation, configuration, and area effects. The model quantitatively simulates such psychophysical lightness data, as well as other data such as discounting the illuminant, the double brilliant illusion, and lightness constancy and contrast effects. The model retina embodies gain control at retinal photoreceptors, and spatial contrast adaptation at the negative feedback circuit between mechanisms that model the inner segment of photoreceptors and interacting horizontal cells. The model can thereby adjust its sensitivity to input intensities ranging from dim moonlight to dazzling sunlight. A new anchoring mechanism, called the Blurred-Highest-Luminance-As-White (BHLAW) rule, helps simulate how surface lightness becomes sensitive to the spatial scale of objects in a scene. The model is also able to process natural color images under variable lighting conditions, and is compared with the popular RETINEX model.Air Force Office of Scientific Research (F496201-01-1-0397); Defense Advanced Research Project and the Office of Naval Research (N00014-95-0409, N00014-01-1-0624

Identifying person re-occurrences for personal photo management applications

Automatic identification of "who" is present in individual digital images within a photo management system using only content-based analysis is an extremely difficult problem. The authors present a system which enables identification of person reoccurrences within a personal photo management application by combining image content-based analysis tools with context data from image capture. This combined system employs automatic face detection and body-patch matching techniques, which collectively facilitate identifying person re-occurrences within images grouped into events based on context data. The authors introduce a face detection approach combining a histogram-based skin detection model and a modified BDF face detection method to detect multiple frontal faces in colour images. Corresponding body patches are then automatically segmented relative to the size, location and orientation of the detected faces in the image. The authors investigate the suitability of using different colour descriptors, including MPEG-7 colour descriptors, color coherent vectors (CCV) and color correlograms for effective body-patch matching. The system has been successfully integrated into the MediAssist platform, a prototype Web-based system for personal photo management, and runs on over 13000 personal photos

Target recognitions in multiple camera CCTV using colour constancy

People tracking using colour feature in crowded scene through CCTV network have been a popular and at the same time a very difficult topic in computer vision. It is mainly because of the difficulty for the acquisition of intrinsic signatures of targets from a single view of the scene. Many factors, such as variable illumination conditions and viewing angles, will induce illusive modification of intrinsic signatures of targets. The objective of this paper is to verify if colour constancy (CC) approach really helps people tracking in CCTV network system. We have testified a number of CC algorithms together with various colour descriptors, to assess the efficiencies of people recognitions from real multi-camera i-LIDS data set via Receiver Operating Characteristics (ROC). It is found that when CC is applied together with some form of colour restoration mechanisms such as colour transfer, the recognition performance can be improved by at least a factor of two. An elementary luminance based CC coupled with a pixel based colour transfer algorithm, together with experimental results are reported in the present paper