On sampling nodes in a network

Random walk is an important tool in many graph mining applications including estimating graph parameters, sampling portions of the graph, and extracting dense communities. In this paper we consider the problem of sampling nodes from a large graph according to a prescribed distribution by using random walk as the basic primitive. Our goal is to obtain algorithms that make a small number of queries to the graph but output a node that is sampled according to the prescribed distribution. Focusing on the uniform distribution case, we study the query complexity of three algorithms and show a near-tight bound expressed in terms of the parameters of the graph such as average degree and the mixing time. Both theoretically and empirically, we show that some algorithms are preferable in practice than the others. We also extend our study to the problem of sampling nodes according to some polynomial function of their degrees; this has implications for designing efficient algorithms for applications such as triangle counting

Approximate Computation and Implicit Regularization for Very Large-scale Data Analysis

Database theory and database practice are typically the domain of computer scientists who adopt what may be termed an algorithmic perspective on their data. This perspective is very different than the more statistical perspective adopted by statisticians, scientific computers, machine learners, and other who work on what may be broadly termed statistical data analysis. In this article, I will address fundamental aspects of this algorithmic-statistical disconnect, with an eye to bridging the gap between these two very different approaches. A concept that lies at the heart of this disconnect is that of statistical regularization, a notion that has to do with how robust is the output of an algorithm to the noise properties of the input data. Although it is nearly completely absent from computer science, which historically has taken the input data as given and modeled algorithms discretely, regularization in one form or another is central to nearly every application domain that applies algorithms to noisy data. By using several case studies, I will illustrate, both theoretically and empirically, the nonobvious fact that approximate computation, in and of itself, can implicitly lead to statistical regularization. This and other recent work suggests that, by exploiting in a more principled way the statistical properties implicit in worst-case algorithms, one can in many cases satisfy the bicriteria of having algorithms that are scalable to very large-scale databases and that also have good inferential or predictive properties.Comment: To appear in the Proceedings of the 2012 ACM Symposium on Principles of Database Systems (PODS 2012

Probabilistic Clustering Using Maximal Matrix Norm Couplings

In this paper, we present a local information theoretic approach to explicitly learn probabilistic clustering of a discrete random variable. Our formulation yields a convex maximization problem for which it is NP-hard to find the global optimum. In order to algorithmically solve this optimization problem, we propose two relaxations that are solved via gradient ascent and alternating maximization. Experiments on the MSR Sentence Completion Challenge, MovieLens 100K, and Reuters21578 datasets demonstrate that our approach is competitive with existing techniques and worthy of further investigation.Comment: Presented at 56th Annual Allerton Conference on Communication, Control, and Computing, 201

Evaluation of mineralogy per geological layers by Approximate Bayesian Computation

We propose a new methodology to perform mineralogic inversion from wellbore logs based on a Bayesian linear regression model. Our method essentially relies on three steps. The first step makes use of Approximate Bayesian Computation (ABC) and selects from the Bayesian generator a set of candidates-volumes corresponding closely to the wellbore data responses. The second step gathers these candidates through a density-based clustering algorithm. A mineral scenario is assigned to each cluster through direct mineralogical inversion, and we provide a confidence estimate for each lithological hypothesis. The advantage of this approach is to explore all possible mineralogy hypotheses that match the wellbore data. This pipeline is tested on both synthetic and real datasets

Assortative mixing in close-packed spatial networks

Background In recent years, there is aroused interest in expressing complex systems as networks of interacting nodes. Using descriptors from graph theory, it has been possible to classify many diverse systems derived from social and physical sciences alike. In particular, folded proteins as examples of self-assembled complex molecules have also been investigated intensely using these tools. However, we need to develop additional measures to classify different systems, in order to dissect the underlying hierarchy. Methodology and Principal Findings In this study, a general analytical relation for the dependence of nearest neighbor degree correlations on degree is derived. Dependence of local clustering on degree is shown to be the sole determining factor of assortative versus disassortative mixing in networks. The characteristics of networks constructed from spatial atomic/molecular systems exemplified by self-organized residue networks built from folded protein structures and block copolymers, atomic clusters and well-compressed polymeric melts are studied. Distributions of statistical properties of the networks are presented. For these densely-packed systems, assortative mixing in the network construction is found to apply, and conditions are derived for a simple linear dependence. Conclusions Our analyses (i) reveal patterns that are common to close-packed clusters of atoms/molecules, (ii) identify the type of surface effects prominent in different close-packed systems, and (iii) associate fingerprints that may be used to classify networks with varying types of correlations

Consistency of Spectral Hypergraph Partitioning under Planted Partition Model

Hypergraph partitioning lies at the heart of a number of problems in machine learning and network sciences. Many algorithms for hypergraph partitioning have been proposed that extend standard approaches for graph partitioning to the case of hypergraphs. However, theoretical aspects of such methods have seldom received attention in the literature as compared to the extensive studies on the guarantees of graph partitioning. For instance, consistency results of spectral graph partitioning under the stochastic block model are well known. In this paper, we present a planted partition model for sparse random non-uniform hypergraphs that generalizes the stochastic block model. We derive an error bound for a spectral hypergraph partitioning algorithm under this model using matrix concentration inequalities. To the best of our knowledge, this is the first consistency result related to partitioning non-uniform hypergraphs.Comment: 35 pages, 2 figures, 1 tabl