482 research outputs found

    Experimental Investigation for Detecting Mitotic Cells in Medical Image using an Automated Algorithm

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    Cancer of the breast is a malignant tumour that originates in the cells of the breast tissue. It is by far the most common kind of cancer found in females around the world, with a projected 2.3 million new cases will be discovered in the year 2020 alone. It is projected that one in eight women will be diagnosed with breast cancer at some point in their life, despite the fact that breast cancer can also occur in men. Breast cancer is a complex condition that can arise from a diverse set of factors, express itself in a variety of ways, and can be treated in a variety of ways. Ductal carcinoma in situ, invasive ductal carcinoma, and invasive lobular carcinoma are all different subtypes. Both the available treatment options and the expected outcome of breast cancer are very variable depending on the particular subtype of the illness. Breast cancer risk factors include drinking alcohol and not getting enough exercise, as well as getting older, having a family history of the disease, having genetic mutations, being exposed to estrogens, and having a family history of the disease. There is not always a connection between having risk factors and developing breast cancer, despite the fact that there can be a link between the two. The prognosis and treatment options for breast cancer are highly dependent on the stage of the disease at the time of diagnosis. During staging, the extent to which the cancer has spread throughout the body and how far it has progressed are both measured. The TNM system, the IAFCM system, the ACM system, and the MPIG system are just few of the staging systems that are used to classify breast cancer. These staging systems consider not only the size of the tumor but also whether or not lymph nodes are involved and whether or not distant metastases are present. The severity of breast cancer symptoms can vary widely, depending not only on the subtype of the disease but also on how far along it has progressed. Alterations in the size or shape of the breast, discharge from the nipple, and alterations in the skin of the breast (such as redness or dimpling) are all common indications. On the other hand, not all cases of breast cancer present themselves in a visible manner, and mammography and other forms of routine screening may be able to detect some of these cases. Options for treating breast cancer vary depending on the patient's condition and the stage of the disease, as well as the patient's overall health and their preferences towards therapy. Common examples of medical interventions include surgery, radiotherapy, chemotherapy, hormone therapy, and targeted therapy. Other examples include. In certain cases, it may be appropriate to participate in more than one form of treatment

    Sensor-AssistedWeighted Average Ensemble Model for Detecting Major Depressive Disorder

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    The present methods of diagnosing depression are entirely dependent on self-report ratings or clinical interviews. Those traditional methods are subjective, where the individual may or may not be answering genuinely to questions. In this paper, the data has been collected using self-report ratings and also using electronic smartwatches. This study aims to develop a weighted average ensemble machine learning model to predict major depressive disorder (MDD) with superior accuracy. The data has been pre-processed and the essential features have been selected using a correlation-based feature selection method. With the selected features, machine learning approaches such as Logistic Regression, Random Forest, and the proposedWeighted Average Ensemble Model are applied. Further, for assessing the performance of the proposed model, the Area under the Receiver Optimization Characteristic Curves has been used. The results demonstrate that the proposed Weighted Average Ensemble model performs with better accuracy than the Logistic Regression and the Random Forest approaches

    Computational models and approaches for lung cancer diagnosis

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    The success of treatment of patients with cancer depends on establishing an accurate diagnosis. To this end, the aim of this study is to developed novel lung cancer diagnostic models. New algorithms are proposed to analyse the biological data and extract knowledge that assists in achieving accurate diagnosis results

    Characterisation of experimentally induced and spontaneously occurring disease within captive bred dasyurids

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    Neosporosis is a disease of worldwide distribution resulting from infection by the obligate intracellular apicomplexan protozoan parasite Neospora caninum, which is a major cause of infectious bovine abortion and a significant economic burden to the cattle industry. Definitive hosts are canid and an extensive range of identified susceptible intermediate hosts now includes native Australian species. Pilot experiments demonstrated the high disease susceptibility and the unexpected observation of rapid and prolific cyst formation in the fat-tailed dunnart (Sminthopsis crassicaudata) following inoculation with N. caninum. These findings contrast those in the immunocompetent rodent models and have enormous implications for the role of the dunnart as an animal model to study the molecular host-parasite interactions contributing to cyst formation. An immunohistochemical investigation of the dunnart host cellular response to inoculation with N. caninum was undertaken to determine if a detectable alteration contributes to cyst formation, compared with the eutherian models. Selective cell labelling was observed using novel antibodies developed against Tasmanian devil proteins (CD4, CD8, IgG and IgM) as well as appropriate labelling with additional antibodies targeting T cells (CD3), B cells (CD79b, PAX5), granulocytes, and the monocyte-macrophage family (MAC387). Toluidine blue labelling of mast cells complemented results. Effective labelling was not obtained with CD79a, interleukin-4, interferon-γ, or MHCII antibodies. Descriptions of pathology such as the site and extent of tissue necrosis in S. crassicaudata resemble those reported in immunocompromised rodent models. The exception is the lack of major involvement of the brain and associated neurological signs. Immunohistopathologic findings suggest the dunnart host cell response resembles that described in eutherians – strongly neutrophilic with fewer macrophages focused on sites of tissue necrosis, with a predominantly T cell nature to any lymphoid response inclusive of CD4 positive T helper cells. Intracellular parasite replication is frequently observed in the absence of a detectable host cellular response. More sensitive alternative techniques such as real time polymerase chain reaction using effective cytokine labelling is recommended to further define the host response to neosporosis. Active surveillance of disease to further define the animal model involved collecting cadavers over 28 months from the dunnart colony maintained at the University of Sydney. An additional 66 S. crassicaudata and S. macroura animals were examined. Of the 28.3% of animals diagnosed with a disorder of growth (n=15), 80.0% were diagnosed with a malignancy (n=12), and the most frequently diagnosed neoplasm was squamous cell carcinoma. Lesions were seen on the rostral mandible (2), pouch (2), distal limb (1), and tail (1) and five of six of these tumours were diagnosed in S. macroura. The single squamous cell carcinoma diagnosed in the pouch of an S. crassicaudata showed a distinctive verrucous growth pattern, prompting consideration of a viral causation. Immunohistochemical investigation of carcinomatous proliferations using multiple bovine papillomavirus markers and an antibody targeting the p16 cell protein found no supportive evidence for a viral association. Additional colony pathology included single or multicentric nodular pyogranulomatous or suppurative disease (botryomycosis) – sometimes a comorbidity of carcinoma. In S. crassicaudata eight cases of gastric dilatation were also identified – with and without trichobezoar formation. Collection and examination of specimens from the colony is ongoing

    An Approach Based on Particle Swarm Optimization for Inspection of Spacecraft Hulls by a Swarm of Miniaturized Robots

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    The remoteness and hazards that are inherent to the operating environments of space infrastructures promote their need for automated robotic inspection. In particular, micrometeoroid and orbital debris impact and structural fatigue are common sources of damage to spacecraft hulls. Vibration sensing has been used to detect structural damage in spacecraft hulls as well as in structural health monitoring practices in industry by deploying static sensors. In this paper, we propose using a swarm of miniaturized vibration-sensing mobile robots realizing a network of mobile sensors. We present a distributed inspection algorithm based on the bio-inspired particle swarm optimization and evolutionary algorithm niching techniques to deliver the task of enumeration and localization of an a priori unknown number of vibration sources on a simplified 2.5D spacecraft surface. Our algorithm is deployed on a swarm of simulated cm-scale wheeled robots. These are guided in their inspection task by sensing vibrations arising from failure points on the surface which are detected by on-board accelerometers. We study three performance metrics: (1) proximity of the localized sources to the ground truth locations, (2) time to localize each source, and (3) time to finish the inspection task given a 75% inspection coverage threshold. We find that our swarm is able to successfully localize the present so

    Investigating biocomplexity through the agent-based paradigm.

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    Capturing the dynamism that pervades biological systems requires a computational approach that can accommodate both the continuous features of the system environment as well as the flexible and heterogeneous nature of component interactions. This presents a serious challenge for the more traditional mathematical approaches that assume component homogeneity to relate system observables using mathematical equations. While the homogeneity condition does not lead to loss of accuracy while simulating various continua, it fails to offer detailed solutions when applied to systems with dynamically interacting heterogeneous components. As the functionality and architecture of most biological systems is a product of multi-faceted individual interactions at the sub-system level, continuum models rarely offer much beyond qualitative similarity. Agent-based modelling is a class of algorithmic computational approaches that rely on interactions between Turing-complete finite-state machines--or agents--to simulate, from the bottom-up, macroscopic properties of a system. In recognizing the heterogeneity condition, they offer suitable ontologies to the system components being modelled, thereby succeeding where their continuum counterparts tend to struggle. Furthermore, being inherently hierarchical, they are quite amenable to coupling with other computational paradigms. The integration of any agent-based framework with continuum models is arguably the most elegant and precise way of representing biological systems. Although in its nascence, agent-based modelling has been utilized to model biological complexity across a broad range of biological scales (from cells to societies). In this article, we explore the reasons that make agent-based modelling the most precise approach to model biological systems that tend to be non-linear and complex

    Tracking the Temporal-Evolution of Supernova Bubbles in Numerical Simulations

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    The study of low-dimensional, noisy manifolds embedded in a higher dimensional space has been extremely useful in many applications, from the chemical analysis of multi-phase flows to simulations of galactic mergers. Building a probabilistic model of the manifolds has helped in describing their essential properties and how they vary in space. However, when the manifold is evolving through time, a joint spatio-temporal modelling is needed, in order to fully comprehend its nature. We propose a first-order Markovian process that propagates the spatial probabilistic model of a manifold at fixed time, to its adjacent temporal stages. The proposed methodology is demonstrated using a particle simulation of an interacting dwarf galaxy to describe the evolution of a cavity generated by a Supernov

    Data Analysis Methods for Software Systems

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    Using statistics, econometrics, machine learning, and functional data analysis methods, we evaluate the consequences of the lockdown during the COVID-19 pandemics for wage inequality and unemployment. We deduce that these two indicators mostly reacted to the first lockdown from March till June 2020. Also, analysing wage inequality, we conduct analysis separately for males and females and different age groups.We noticed that young females were affected mostly by the lockdown.Nevertheless, all the groups reacted to the lockdown at some level

    Using MapReduce Streaming for Distributed Life Simulation on the Cloud

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    Distributed software simulations are indispensable in the study of large-scale life models but often require the use of technically complex lower-level distributed computing frameworks, such as MPI. We propose to overcome the complexity challenge by applying the emerging MapReduce (MR) model to distributed life simulations and by running such simulations on the cloud. Technically, we design optimized MR streaming algorithms for discrete and continuous versions of Conway’s life according to a general MR streaming pattern. We chose life because it is simple enough as a testbed for MR’s applicability to a-life simulations and general enough to make our results applicable to various lattice-based a-life models. We implement and empirically evaluate our algorithms’ performance on Amazon’s Elastic MR cloud. Our experiments demonstrate that a single MR optimization technique called strip partitioning can reduce the execution time of continuous life simulations by 64%. To the best of our knowledge, we are the first to propose and evaluate MR streaming algorithms for lattice-based simulations. Our algorithms can serve as prototypes in the development of novel MR simulation algorithms for large-scale lattice-based a-life models.https://digitalcommons.chapman.edu/scs_books/1014/thumbnail.jp
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