Subgroup Discovery trhough Evolutionary Fuzzy Systems applied to Bioinformatic problems

Subgroup discovery is a descriptive data mining technique using supervised learning. This paper presents a summary about the main properties and elements about subgroup discovery task. In addition, we will focus on the suitability and potential of the search performed by evolutionary algorithms in order to apply in the development of subgroup discovery algorithms, and in the use of fuzzy logic which is a soft computing technique very close to the human reasoning. The hybridisation of both techniques are well known as evolutionary fuzzy system. The most relevant applications of evolutionary fuzzy systems for subgroup discovery in the bioinformatics domains are outlined in this work. Specifically, these algorithms are applied to a problem based on the Influenza A virus and the accute sore throat problem

Analysing the Moodle e-learning platform through subgroup discovery algorithms based on evolutionary fuzzy systems

Nowadays, there is a increasing in the use of learning management systems from the universities. This type of systems are also known under other di erent terms as course management systems or learning content management systems. Speci cally, these systems are e-learning platforms o ering di erent facilities for information sharing and communication between the participants in the e-learning process. This contribution presents an experimental study with several subgroup discovery algorithms based on evolutionary fuzzy systems using data from a web-based education system. The main objective of this contribution is to extract unusual subgroups to describe possible relationships between the use of the e-learning platform and marks obtained by the students. The results obtained by the best performing algorithm, NMEEF-SD, are also presented. The most representative results obtained by this algorithm are summarised in order to obtain knowledge that can allow teachers to take actions to improve student performance

KEEL 3.0: an open source software for multi-stage analysis in data mining

This paper introduces the 3rd major release of the KEEL Software. KEEL is an open source Java framework (GPLv3 license) that provides a number of modules to perform a wide variety of data mining tasks. It includes tools to performdata management, design of multiple kind of experiments, statistical analyses, etc. This framework also contains KEEL-dataset, a data repository for multiple learning tasks featuring data partitions and algorithms’ results over these problems. In this work, we describe the most recent components added to KEEL 3.0, including new modules for semi-supervised learning, multi-instance learning, imbalanced classification and subgroup discovery. In addition, a new interface in R has been incorporated to execute algorithms included in KEEL. These new features greatly improve the versatility of KEEL to deal with more modern data mining problems

Subgroup Discovery: Real-World Applications

Subgroup discovery is a data mining technique which extracts interesting rules with respect to a target variable. An important characteristic of this task is the combination of predictive and descriptive induction. In this paper, an overview about subgroup discovery is performed. In addition, di erent real-world applications solved through evolutionary algorithms where the suitability and potential of this type of algorithms for the development of subgroup discovery algorithms are presented

Automatic synthesis of fuzzy systems: An evolutionary overview with a genetic programming perspective

Studies in Evolutionary Fuzzy Systems (EFSs) began in the 90s and have experienced a fast development since then, with applications to areas such as pattern recognition, curve‐fitting and regression, forecasting and control. An EFS results from the combination of a Fuzzy Inference System (FIS) with an Evolutionary Algorithm (EA). This relationship can be established for multiple purposes: fine‐tuning of FIS's parameters, selection of fuzzy rules, learning a rule base or membership functions from scratch, and so forth. Each facet of this relationship creates a strand in the literature, as membership function fine‐tuning, fuzzy rule‐based learning, and so forth and the purpose here is to outline some of what has been done in each aspect. Special focus is given to Genetic Programming‐based EFSs by providing a taxonomy of the main architectures available, as well as by pointing out the gaps that still prevail in the literature. The concluding remarks address some further topics of current research and trends, such as interpretability analysis, multiobjective optimization, and synthesis of a FIS through Evolving methods

A soft computing decision support framework for e-learning

Tesi per compendi de publicacions.Supported by technological development and its impact on everyday activities, e-Learning and b-Learning (Blended Learning) have experienced rapid growth mainly in higher education and training. Its inherent ability to break both physical and cultural distances, to disseminate knowledge and decrease the costs of the teaching-learning process allows it to reach anywhere and anyone. The educational community is divided as to its role in the future. It is believed that by 2019 half of the world's higher education courses will be delivered through e-Learning. While supporters say that this will be the educational mode of the future, its detractors point out that it is a fashion, that there are huge rates of abandonment and that their massification and potential low quality, will cause its fall, assigning it a major role of accompanying traditional education. There are, however, two interrelated features where there seems to be consensus. On the one hand, the enormous amount of information and evidence that Learning Management Systems (LMS) generate during the e-Learning process and which is the basis of the part of the process that can be automated. In contrast, there is the fundamental role of e-tutors and etrainers who are guarantors of educational quality. These are continually overwhelmed by the need to provide timely and effective feedback to students, manage endless particular situations and casuistics that require decision making and process stored information. In this sense, the tools that e-Learning platforms currently provide to obtain reports and a certain level of follow-up are not sufficient or too adequate. It is in this point of convergence Information-Trainer, where the current developments of the LMS are centered and it is here where the proposed thesis tries to innovate. This research proposes and develops a platform focused on decision support in e-Learning environments. Using soft computing and data mining techniques, it extracts knowledge from the data produced and stored by e-Learning systems, allowing the classification, analysis and generalization of the extracted knowledge. It includes tools to identify models of students' learning behavior and, from them, predict their future performance and enable trainers to provide adequate feedback. Likewise, students can self-assess, avoid those ineffective behavior patterns, and obtain real clues about how to improve their performance in the course, through appropriate routes and strategies based on the behavioral model of successful students. The methodological basis of the mentioned functionalities is the Fuzzy Inductive Reasoning (FIR), which is particularly useful in the modeling of dynamic systems. During the development of the research, the FIR methodology has been improved and empowered by the inclusion of several algorithms. First, an algorithm called CR-FIR, which allows determining the Causal Relevance that have the variables involved in the modeling of learning and assessment of students. In the present thesis, CR-FIR has been tested on a comprehensive set of classical test data, as well as real data sets, belonging to different areas of knowledge. Secondly, the detection of atypical behaviors in virtual campuses was approached using the Generative Topographic Mapping (GTM) methodology, which is a probabilistic alternative to the well-known Self-Organizing Maps. GTM was used simultaneously for clustering, visualization and detection of atypical data. The core of the platform has been the development of an algorithm for extracting linguistic rules in a language understandable to educational experts, which helps them to obtain patterns of student learning behavior. In order to achieve this functionality, the LR-FIR algorithm (Extraction of Linguistic Rules in FIR) was designed and developed as an extension of FIR that allows both to characterize general behavior and to identify interesting patterns. In the case of the application of the platform to several real e-Learning courses, the results obtained demonstrate its feasibility and originality. The teachers' perception about the usability of the tool is very good, and they consider that it could be a valuable resource to mitigate the time requirements of the trainer that the e-Learning courses demand. The identification of student behavior models and prediction processes have been validated as to their usefulness by expert trainers. LR-FIR has been applied and evaluated in a wide set of real problems, not all of them in the educational field, obtaining good results. The structure of the platform makes it possible to assume that its use is potentially valuable in those domains where knowledge management plays a preponderant role, or where decision-making processes are a key element, e.g. ebusiness, e-marketing, customer management, to mention just a few. The Soft Computing tools used and developed in this research: FIR, CR-FIR, LR-FIR and GTM, have been applied successfully in other real domains, such as music, medicine, weather behaviors, etc.Soportado por el desarrollo tecnológico y su impacto en las diferentes actividades cotidianas, el e-Learning (o aprendizaje electrónico) y el b-Learning (Blended Learning o aprendizaje mixto), han experimentado un crecimiento vertiginoso principalmente en la educación superior y la capacitación. Su habilidad inherente para romper distancias tanto físicas como culturales, para diseminar conocimiento y disminuir los costes del proceso enseñanza aprendizaje le permite llegar a cualquier sitio y a cualquier persona. La comunidad educativa se encuentra dividida en cuanto a su papel en el futuro. Se cree que para el año 2019 la mitad de los cursos de educación superior del mundo se impartirá a través del e-Learning. Mientras que los partidarios aseguran que ésta será la modalidad educativa del futuro, sus detractores señalan que es una moda, que hay enormes índices de abandono y que su masificación y potencial baja calidad, provocará su caída, reservándole un importante papel de acompañamiento a la educación tradicional. Hay, sin embargo, dos características interrelacionadas donde parece haber consenso. Por un lado, la enorme generación de información y evidencias que los sistemas de gestión del aprendizaje o LMS (Learning Management System) generan durante el proceso educativo electrónico y que son la base de la parte del proceso que se puede automatizar. En contraste, está el papel fundamental de los e-tutores y e-formadores que son los garantes de la calidad educativa. Éstos se ven continuamente desbordados por la necesidad de proporcionar retroalimentación oportuna y eficaz a los alumnos, gestionar un sin fin de situaciones particulares y casuísticas que requieren toma de decisiones y procesar la información almacenada. En este sentido, las herramientas que las plataformas de e-Learning proporcionan actualmente para obtener reportes y cierto nivel de seguimiento no son suficientes ni demasiado adecuadas. Es en este punto de convergencia Información-Formador, donde están centrados los actuales desarrollos de los LMS y es aquí donde la tesis que se propone pretende innovar. La presente investigación propone y desarrolla una plataforma enfocada al apoyo en la toma de decisiones en ambientes e-Learning. Utilizando técnicas de Soft Computing y de minería de datos, extrae conocimiento de los datos producidos y almacenados por los sistemas e-Learning permitiendo clasificar, analizar y generalizar el conocimiento extraído. Incluye herramientas para identificar modelos del comportamiento de aprendizaje de los estudiantes y, a partir de ellos, predecir su desempeño futuro y permitir a los formadores proporcionar una retroalimentación adecuada. Así mismo, los estudiantes pueden autoevaluarse, evitar aquellos patrones de comportamiento poco efectivos y obtener pistas reales acerca de cómo mejorar su desempeño en el curso, mediante rutas y estrategias adecuadas a partir del modelo de comportamiento de los estudiantes exitosos. La base metodológica de las funcionalidades mencionadas es el Razonamiento Inductivo Difuso (FIR, por sus siglas en inglés), que es particularmente útil en el modelado de sistemas dinámicos. Durante el desarrollo de la investigación, la metodología FIR ha sido mejorada y potenciada mediante la inclusión de varios algoritmos. En primer lugar un algoritmo denominado CR-FIR, que permite determinar la Relevancia Causal que tienen las variables involucradas en el modelado del aprendizaje y la evaluación de los estudiantes. En la presente tesis, CR-FIR se ha probado en un conjunto amplio de datos de prueba clásicos, así como conjuntos de datos reales, pertenecientes a diferentes áreas de conocimiento. En segundo lugar, la detección de comportamientos atípicos en campus virtuales se abordó mediante el enfoque de Mapeo Topográfico Generativo (GTM), que es una alternativa probabilística a los bien conocidos Mapas Auto-organizativos. GTM se utilizó simultáneamente para agrupamiento, visualización y detección de datos atípicos. La parte medular de la plataforma ha sido el desarrollo de un algoritmo de extracción de reglas lingüísticas en un lenguaje entendible para los expertos educativos, que les ayude a obtener los patrones del comportamiento de aprendizaje de los estudiantes. Para lograr dicha funcionalidad, se diseñó y desarrolló el algoritmo LR-FIR, (extracción de Reglas Lingüísticas en FIR, por sus siglas en inglés) como una extensión de FIR que permite tanto caracterizar el comportamiento general, como identificar patrones interesantes. En el caso de la aplicación de la plataforma a varios cursos e-Learning reales, los resultados obtenidos demuestran su factibilidad y originalidad. La percepción de los profesores acerca de la usabilidad de la herramienta es muy buena, y consideran que podría ser un valioso recurso para mitigar los requerimientos de tiempo del formador que los cursos e-Learning exigen. La identificación de los modelos de comportamiento de los estudiantes y los procesos de predicción han sido validados en cuanto a su utilidad por los formadores expertos. LR-FIR se ha aplicado y evaluado en un amplio conjunto de problemas reales, no todos ellos del ámbito educativo, obteniendo buenos resultados. La estructura de la plataforma permite suponer que su utilización es potencialmente valiosa en aquellos dominios donde la administración del conocimiento juegue un papel preponderante, o donde los procesos de toma de decisiones sean una pieza clave, por ejemplo, e-business, e-marketing, administración de clientes, por mencionar sólo algunos. Las herramientas de Soft Computing utilizadas y desarrolladas en esta investigación: FIR, CR-FIR, LR-FIR y GTM, ha sido aplicadas con éxito en otros dominios reales, como música, medicina, comportamientos climáticos, etc.Postprint (published version

Enhancing the scalability of a genetic algorithm to discover quantitative association rules in large-scale datasets

Association rule mining is a well-known methodology to discover significant and apparently hidden relations among attributes in a subspace of instances from datasets. Genetic algorithms have been extensively used to find interesting association rules. However, the rule-matching task of such techniques usually requires high computational and memory requirements. The use of efficient computational techniques has become a task of the utmost importance due to the high volume of generated data nowadays. Hence, this paper aims at improving the scalability of quantitative association rule mining techniques based on genetic algorithms to handle large-scale datasets without quality loss in the results obtained. For this purpose, a new representation of the individuals, new genetic operators and a windowing-based learning scheme are proposed to achieve successfully such challenging task. Specifically, the proposed techniques are integrated into the multi-objective evolutionary algorithm named QARGA-M to assess their performances. Both the standard version and the enhanced one of QARGA-M have been tested in several datasets that present different number of attributes and instances. Furthermore, the proposed methodologies have been integrated into other existing techniques based in genetic algorithms to discover quantitative association rules. The comparative analysis performed shows significant improvements of QARGA-M and other existing genetic algorithms in terms of computational costs without losing quality in the results when the proposed techniques are applied.Ministerio de Ciencia y Tecnología TIN2011- 28956-C02-02Junta de Andalucía TIC-7528Junta de Andalucía P12-TIC-1728Universidad Pablo de Olavide APPB81309

Attributes regrouping in Fuzzy Rule Based Classification Systems: an intra-classes approach

International audienceFuzzy rule-based classification systems (FRBCS) are able to build linguistic interpretable models, they automatically generate fuzzy if-then rules and use them to classify new observations. However, in these supervised learning systems, a high number of predictive attributes leads to an exponential increase of the number of generated rules. Moreover the antecedent conditions of the obtained rules are very large since they contain all the attributes that describe the examples. Therefore the accuracy of these systems as well as their interpretability degraded. To address this problem, we propose to use ensemble methods for FRBCS where the decisions of different classifiers are combined in order to form the final classification model. We are interested in particular in ensemble methods which split the attributes into subgroups and treat each subgroup separately. We propose to regroup attributes by correlation search among the training set elements that belongs to the same class, such an intra-classes correlation search allows to characterize each class separately. Several experiences were carried out on various data. The results show a reduction in the number of rules and of antecedents without altering accuracy, on the contrary classification rates are even improved