Integrating multiple clusters for compute-intensive applications

Multicluster grids provide one promising solution to satisfying the growing computational demands of compute-intensive applications. However, it is challenging to seamlessly integrate all participating clusters in different domains into a single virtual computational platform. In order to fully utilize the capabilities of multicluster grids, computer scientists need to deal with the issue of joining together participating autonomic systems practically and efficiently to execute grid-enabled applications. Driven by several compute-intensive applications, this theses develops a multicluster grid management toolkit called Pelecanus to bridge the gap between user\u27s needs and the system\u27s heterogeneity. Application scientists will be able to conduct very large-scale execution across multiclusters with transparent QoS assurance. A novel model called DA-TC (Dynamic Assignment with Task Containers) is developed and is integrated into Pelecanus. This model uses the concept of a task container that allows one to decouple resource allocation from resource binding. It employs static load balancing for task container distribution and dynamic load balancing for task assignment. The slowest resources become useful rather than be bottlenecks in this manner. A cluster abstraction is implemented, which not only provides various cluster information for the DA-TC execution model, but also can be used as a standalone toolkit to monitor and evaluate the clusters\u27 functionality and performance. The performance of the proposed DA-TC model is evaluated both theoretically and experimentally. Results demonstrate the importance of reducing queuing time in decreasing the total turnaround time for an application. Experiments were conducted to understand the performance of various aspects of the DA-TC model. Experiments showed that our model could significantly reduce turnaround time and increase resource utilization for our targeted application scenarios. Four applications are implemented as case studies to determine the applicability of the DA-TC model. In each case the turnaround time is greatly reduced, which demonstrates that the DA-TC model is efficient for assisting application scientists in conducting their research. In addition, virtual resources were integrated into the DA-TC model for application execution. Experiments show that the execution model proposed in this thesis can work seamlessly with multiple hybrid grid/cloud resources to achieve reduced turnaround time

Embedded, Embodied, Adaptive: Architecture and Computation

This catalogue of work marks the second year of the MSc Adaptive Architecture and Computation, UCL Bartlett\'s one-year taught MSc in the field of digital design. Bringing together research at the Bartlett with cutting edge practice, this course aims to give students a solid theoretical and technical foundation for the use of computation as a means to realise their designs, understand the built environment, and create architecture. Themes of investigation include how the built environment can be adapted to its occupants; how form may be generated or evolved parametrically; how the experience of space can be enhanced through the integrated use of new media. In each case, computational methods are sought to improve the design and use of architecture, rather than simply be a mechanical tool for its representation. With this in mind, students are taught the fundamental theory and skills necessary to manipulate their technology at a sophisticated level. Studio time is dedicated to learning scripting and programming within a series of workshops conceived especially for designers

Diffusion in crowded biological environments: applications of Brownian dynamics

Biochemical reactions in living systems occur in complex, heterogeneous media with total concentrations of macromolecules in the range of 50 - 400 mgml. Molecular species occupy a significant fraction of the immersing medium, up to 40% of volume. Such complex and volume-occupied environments are generally termed 'crowded' and/or 'confined'. In crowded conditions non-specific interactions between macromolecules may hinder diffusion - a major process determining metabolism, transport, and signaling. Also, the crowded media can alter, both qualitatively and quantitatively, the reactions in vivo in comparison with their in vitro counterparts. This review focuses on recent developments in particle-based Brownian dynamics algorithms, their applications to model diffusive transport in crowded systems, and their abilities to reproduce and predict the behavior of macromolecules under in vivo conditions

Tangible user interfaces : past, present and future directions

In the last two decades, Tangible User Interfaces (TUIs) have emerged as a new interface type that interlinks the digital and physical worlds. Drawing upon users' knowledge and skills of interaction with the real non-digital world, TUIs show a potential to enhance the way in which people interact with and leverage digital information. However, TUI research is still in its infancy and extensive research is required in or- der to fully understand the implications of tangible user interfaces, to develop technologies that further bridge the digital and the physical, and to guide TUI design with empirical knowledge. This paper examines the existing body of work on Tangible User In- terfaces. We start by sketching the history of tangible user interfaces, examining the intellectual origins of this field. We then present TUIs in a broader context, survey application domains, and review frame- works and taxonomies. We also discuss conceptual foundations of TUIs including perspectives from cognitive sciences, phycology, and philoso- phy. Methods and technologies for designing, building, and evaluating TUIs are also addressed. Finally, we discuss the strengths and limita- tions of TUIs and chart directions for future research

Modelling evaporation and phase behaviour of particle suspensions

We present two statistical mechanics based methods for simulating the evaporation of droplets of nanoparticle suspensions from upon a heterogeneous surface. These are based on a generalised lattice-gas model. Properties such as wettability and the dynamic contact angle, are determined by the attraction strength parameters between particles and from the dynamic mobility coefficients. Both models incorporate the effects of surface roughness and slip at the surface. The two approaches used are Monte Carlo (MC) computer simulations and Dynamical Density Functional Theory (DDFT). We calculate the bulk fluid phase behaviour including the influence of the suspended nanoparticles, comparing results from the two approaches. We also calculate thermodynamic quantities such as the surface tensions. Our results show that the presence of steps in the surface can be crucial in controlling dewetting from heterogeneous surfaces. We also observe that coffee ring stains can be formed via the coupling of evaporation to phase separation and that the advective hydrodynamics within the droplets in not required for ring stains to form

Perspectives of Nuclear Physics in Europe: NuPECC Long Range Plan 2010

The goal of this European Science Foundation Forward Look into the future of Nuclear Physics is to bring together the entire Nuclear Physics community in Europe to formulate a coherent plan of the best way to develop the field in the coming decade and beyond.<p></p> The primary aim of Nuclear Physics is to understand the origin, evolution, structure and phases of strongly interacting matter, which constitutes nearly 100% of the visible matter in the universe. This is an immensely important and challenging task that requires the concerted effort of scientists working in both theory and experiment, funding agencies, politicians and the public.<p></p> Nuclear Physics projects are often “big science”, which implies large investments and long lead times. They need careful forward planning and strong support from policy makers. This Forward Look provides an excellent tool to achieve this. It represents the outcome of detailed scrutiny by Europe’s leading experts and will help focus the views of the scientific community on the most promising directions in the field and create the basis for funding agencies to provide adequate support.<p></p> The current NuPECC Long Range Plan 2010 “Perspectives of Nuclear Physics in Europe” resulted from consultation with close to 6 000 scientists and engineers over a period of approximately one year. Its detailed recommendations are presented on the following pages. For the interested public, a short summary brochure has been produced to accompany the Forward Look.<p></p&gt