Brief Announcement: Efficient Load-Balancing Through Distributed Token Dropping

We introduce a new graph problem, the token dropping game, and we show how to solve it efficiently in a distributed setting. We use the token dropping game as a tool to design an efficient distributed algorithm for the stable orientation problem, which is a special case of the more general locally optimal semi-matching problem. The prior work by Czygrinow et al. (DISC 2012) finds a locally optimal semi-matching in O(??) rounds in graphs of maximum degree ?, which directly implies an algorithm with the same runtime for stable orientations. We improve the runtime to O(??) for stable orientations and prove a lower bound of ?(?) rounds

Algorithms for Fundamental Problems in Computer Networks.

Traditional studies of algorithms consider the sequential setting, where the whole input data is fed into a single device that computes the solution. Today, the network, such as the Internet, contains of a vast amount of information. The overhead of aggregating all the information into a single device is too expensive, so a distributed approach to solve the problem is often preferable. In this thesis, we aim to develop efficient algorithms for the following fundamental graph problems that arise in networks, in both sequential and distributed settings. Graph coloring is a basic symmetry breaking problem in distributed computing. Each node is to be assigned a color such that adjacent nodes are assigned different colors. Both the efficiency and the quality of coloring are important measures of an algorithm. One of our main contributions is providing tools for obtaining colorings of good quality whose existence are non-trivial. We also consider other optimization problems in the distributed setting. For example, we investigate efficient methods for identifying the connectivity as well as the bottleneck edges in a distributed network. Our approximation algorithm is almost-tight in the sense that the running time matches the known lower bound up to a poly-logarithmic factor. For another example, we model how the task allocation can be done in ant colonies, when the ants may have different capabilities in doing different tasks. The matching problems are one of the classic combinatorial optimization problems. We study the weighted matching problems in the sequential setting. We give a new scaling algorithm for finding the maximum weight perfect matching in general graphs, which improves the long-standing Gabow-Tarjan's algorithm (1991) and matches the running time of the best weighted bipartite perfect matching algorithm (Gabow and Tarjan, 1989). Furthermore, for the maximum weight matching problem in bipartite graphs, we give a faster scaling algorithm whose running time is faster than Gabow and Tarjan's weighted bipartite {it perfect} matching algorithm.PhDComputer Science and EngineeringUniversity of Michigan, Horace H. Rackham School of Graduate Studieshttp://deepblue.lib.umich.edu/bitstream/2027.42/113540/1/hsinhao_1.pd

Risk-Averse Matchings over Uncertain Graph Databases

A large number of applications such as querying sensor networks, and analyzing protein-protein interaction (PPI) networks, rely on mining uncertain graph and hypergraph databases. In this work we study the following problem: given an uncertain, weighted (hyper)graph, how can we efficiently find a (hyper)matching with high expected reward, and low risk? This problem naturally arises in the context of several important applications, such as online dating, kidney exchanges, and team formation. We introduce a novel formulation for finding matchings with maximum expected reward and bounded risk under a general model of uncertain weighted (hyper)graphs that we introduce in this work. Our model generalizes probabilistic models used in prior work, and captures both continuous and discrete probability distributions, thus allowing to handle privacy related applications that inject appropriately distributed noise to (hyper)edge weights. Given that our optimization problem is NP-hard, we turn our attention to designing efficient approximation algorithms. For the case of uncertain weighted graphs, we provide a $\frac{1}{3}$-approximation algorithm, and a $\frac{1}{5}$-approximation algorithm with near optimal run time. For the case of uncertain weighted hypergraphs, we provide a $\Omega(\frac{1}{k})$-approximation algorithm, where $k$ is the rank of the hypergraph (i.e., any hyperedge includes at most $k$ nodes), that runs in almost (modulo log factors) linear time. We complement our theoretical results by testing our approximation algorithms on a wide variety of synthetic experiments, where we observe in a controlled setting interesting findings on the trade-off between reward, and risk. We also provide an application of our formulation for providing recommendations of teams that are likely to collaborate, and have high impact.Comment: 25 page

New sublinear methods in the struggle against classical problems

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2010.Cataloged from PDF version of thesis.Includes bibliographical references (p. 129-134).We study the time and query complexity of approximation algorithms that access only a minuscule fraction of the input, focusing on two classical sources of problems: combinatorial graph optimization and manipulation of strings. The tools we develop find applications outside of the area of sublinear algorithms. For instance, we obtain a more efficient approximation algorithm for edit distance and distributed algorithms for combinatorial problems on graphs that run in a constant number of communication rounds. Combinatorial Graph Optimization Problems: The graph optimization problems considered by us include vertex cover, maximum matching, and dominating set. A graph algorithm is traditionally called a constant-time algorithm if it runs in time that is a function of only the maximum vertex degree, and in particular, does not depend on the number of vertices in the graph. We show a general local computation framework that allows for transforming many classical greedy approximation algorithms into constant-time approximation algorithms for the optimal solution size. By applying the framework, we obtain the first constant-time algorithm that approximates the maximum matching size up to an additive En, where E is an arbitrary positive constant, and n is the number of vertices in the graph. It is known that a purely additive En approximation is not computable in constant time for vertex cover and dominating set. We show that nevertheless, such an approximation is possible for a wide class of graphs, which includes planar graphs (and other minor-free families of graphs) and graphs of subexponential growth (a common property of networks). This result is obtained via locally computing a good partition of the input graph in our local computation framework. The tools and algorithms developed for these problems find several other applications: " Our methods can be used to construct local distributed approximation algorithms for some combinatorial optimization problems. " Our matching algorithm yields the first constant-time testing algorithm for distinguishing bounded-degree graphs that have a perfect matching from those far from having this property. " We give a simple proof that there is a constant-time algorithm distinguishing bounded-degree graphs that are planar (or in general, have a minor-closed property) from those that are far from planarity (or the given minor-closed property, respectively). Our tester is also much more efficient than the original tester of Benjamini, Schramm, and Shapira (STOC 2008). Edit Distance. We study a new asymmetric query model for edit distance. In this model, the input consists of two strings x and y, and an algorithm can access y in an unrestricted manner (without charge), while being charged for querying every symbol of x. We design an algorithm in the asymmetric query model that makes a small number of queries to distinguish the case when the edit distance between x and y is small from the case when it is large. Our result in the asymmetric query model gives rise to a near-linear time algorithm that approximates the edit distance between two strings to within a polylogarithmic factor. For strings of length n and every fixed E > 0, the algorithm computes a (log n)0(/0) approximation in n1i' time. This is an exponential improvement over the previously known near-linear time approximation factor 20( log (Andoni and Onak, STOC 2009; building on Ostrovsky and Rabani, J. ACM 2007). The algorithm of Andoni and Onak was the first to run in O(n 2 -) time, for any fixed constant 6 > 0, and obtain a subpolynomial, n"(o), approximation factor, despite a sequence of papers. We provide a nearly-matching lower bound on the number of queries. Our lower bound is the first to expose hardness of edit distance stemming from the input strings being "repetitive", which means that many of their substrings are approximately identical. Consequently, our lower bound provides the first rigorous separation on the complexity of approximation between edit distance and Ulam distance.by Krzysztof Onak.Ph.D

Theoretically Efficient Parallel Graph Algorithms Can Be Fast and Scalable

There has been significant recent interest in parallel graph processing due to the need to quickly analyze the large graphs available today. Many graph codes have been designed for distributed memory or external memory. However, today even the largest publicly-available real-world graph (the Hyperlink Web graph with over 3.5 billion vertices and 128 billion edges) can fit in the memory of a single commodity multicore server. Nevertheless, most experimental work in the literature report results on much smaller graphs, and the ones for the Hyperlink graph use distributed or external memory. Therefore, it is natural to ask whether we can efficiently solve a broad class of graph problems on this graph in memory. This paper shows that theoretically-efficient parallel graph algorithms can scale to the largest publicly-available graphs using a single machine with a terabyte of RAM, processing them in minutes. We give implementations of theoretically-efficient parallel algorithms for 20 important graph problems. We also present the optimizations and techniques that we used in our implementations, which were crucial in enabling us to process these large graphs quickly. We show that the running times of our implementations outperform existing state-of-the-art implementations on the largest real-world graphs. For many of the problems that we consider, this is the first time they have been solved on graphs at this scale. We have made the implementations developed in this work publicly-available as the Graph-Based Benchmark Suite (GBBS).Comment: This is the full version of the paper appearing in the ACM Symposium on Parallelism in Algorithms and Architectures (SPAA), 201

Deterministic Distributed Edge-Coloring via Hypergraph Maximal Matching

We present a deterministic distributed algorithm that computes a $(2\Delta-1)$-edge-coloring, or even list-edge-coloring, in any $n$-node graph with maximum degree $\Delta$, in $O(\log^7 \Delta \log n)$ rounds. This answers one of the long-standing open questions of \emph{distributed graph algorithms} from the late 1980s, which asked for a polylogarithmic-time algorithm. See, e.g., Open Problem 4 in the Distributed Graph Coloring book of Barenboim and Elkin. The previous best round complexities were $2^{O(\sqrt{\log n})}$ by Panconesi and Srinivasan [STOC'92] and $\tilde{O}(\sqrt{\Delta}) + O(\log^* n)$ by Fraigniaud, Heinrich, and Kosowski [FOCS'16]. A corollary of our deterministic list-edge-coloring also improves the randomized complexity of $(2\Delta-1)$-edge-coloring to poly$(\log\log n)$ rounds. The key technical ingredient is a deterministic distributed algorithm for \emph{hypergraph maximal matching}, which we believe will be of interest beyond this result. In any hypergraph of rank $r$ --- where each hyperedge has at most $r$ vertices --- with $n$ nodes and maximum degree $\Delta$, this algorithm computes a maximal matching in $O(r^5 \log^{6+\log r } \Delta \log n)$ rounds. This hypergraph matching algorithm and its extensions lead to a number of other results. In particular, a polylogarithmic-time deterministic distributed maximal independent set algorithm for graphs with bounded neighborhood independence, hence answering Open Problem 5 of Barenboim and Elkin's book, a $((\log \Delta/\varepsilon)^{O(\log (1/\varepsilon))})$-round deterministic algorithm for $(1+\varepsilon)$-approximation of maximum matching, and a quasi-polylogarithmic-time deterministic distributed algorithm for orienting $\lambda$-arboricity graphs with out-degree at most $(1+\varepsilon)\lambda$, for any constant $\varepsilon>0$, hence partially answering Open Problem 10 of Barenboim and Elkin's book

On Derandomizing Local Distributed Algorithms

The gap between the known randomized and deterministic local distributed algorithms underlies arguably the most fundamental and central open question in distributed graph algorithms. In this paper, we develop a generic and clean recipe for derandomizing LOCAL algorithms. We also exhibit how this simple recipe leads to significant improvements on a number of problem. Two main results are: - An improved distributed hypergraph maximal matching algorithm, improving on Fischer, Ghaffari, and Kuhn [FOCS'17], and giving improved algorithms for edge-coloring, maximum matching approximation, and low out-degree edge orientation. The first gives an improved algorithm for Open Problem 11.4 of the book of Barenboim and Elkin, and the last gives the first positive resolution of their Open Problem 11.10. - An improved distributed algorithm for the Lov\'{a}sz Local Lemma, which gets closer to a conjecture of Chang and Pettie [FOCS'17], and moreover leads to improved distributed algorithms for problems such as defective coloring and $k$-SAT.Comment: 37 page

JGraphT -- A Java library for graph data structures and algorithms

Mathematical software and graph-theoretical algorithmic packages to efficiently model, analyze and query graphs are crucial in an era where large-scale spatial, societal and economic network data are abundantly available. One such package is JGraphT, a programming library which contains very efficient and generic graph data-structures along with a large collection of state-of-the-art algorithms. The library is written in Java with stability, interoperability and performance in mind. A distinctive feature of this library is the ability to model vertices and edges as arbitrary objects, thereby permitting natural representations of many common networks including transportation, social and biological networks. Besides classic graph algorithms such as shortest-paths and spanning-tree algorithms, the library contains numerous advanced algorithms: graph and subgraph isomorphism; matching and flow problems; approximation algorithms for NP-hard problems such as independent set and TSP; and several more exotic algorithms such as Berge graph detection. Due to its versatility and generic design, JGraphT is currently used in large-scale commercial, non-commercial and academic research projects. In this work we describe in detail the design and underlying structure of the library, and discuss its most important features and algorithms. A computational study is conducted to evaluate the performance of JGraphT versus a number of similar libraries. Experiments on a large number of graphs over a variety of popular algorithms show that JGraphT is highly competitive with other established libraries such as NetworkX or the BGL.Comment: Major Revisio