New recurrence relationships between orthogonal polynomials which lead to new Lanczos-type algorithms

Lanczos methods for solving Ax = b consist in constructing a sequence of vectors (Xk),k = 1,... such that rk = b-AXk= Pk(A)r0, where Pk is the orthogonal polynomial of degree at most k with respect to the linear functional c defined as c(εi) = (y, Air0). Let P(1)k be the regular monic polynomial of degree k belonging to the family of formal orthogonal polynomials (FOP) with respect to c(1) defined as c(1)(εi) = c(εi+1). All Lanczos-type algorithms are characterized by the choice of one or two recurrence relationships, one for Pk and one for P(1)k. We shall study some new recurrence relations involving these two polynomials and their possible combinations to obtain new Lanczos-type algorithms. We will show that some recurrence relations exist, but cannot be used to derive Lanczos-type algorithms, while others do not exist at all

Transition probabilities for general birth-death processes with applications in ecology, genetics, and evolution

A birth-death process is a continuous-time Markov chain that counts the number of particles in a system over time. In the general process with $n$ current particles, a new particle is born with instantaneous rate $\lambda_n$ and a particle dies with instantaneous rate $\mu_n$. Currently no robust and efficient method exists to evaluate the finite-time transition probabilities in a general birth-death process with arbitrary birth and death rates. In this paper, we first revisit the theory of continued fractions to obtain expressions for the Laplace transforms of these transition probabilities and make explicit an important derivation connecting transition probabilities and continued fractions. We then develop an efficient algorithm for computing these probabilities that analyzes the error associated with approximations in the method. We demonstrate that this error-controlled method agrees with known solutions and outperforms previous approaches to computing these probabilities. Finally, we apply our novel method to several important problems in ecology, evolution, and genetics

Fast algorithm for border bases of Artinian Gorenstein algebras

Given a multi-index sequence $$\sigma$$, we present a new efficient algorithm to compute generators of the linear recurrence relations between the terms of $$\sigma$$. We transform this problem into an algebraic one, by identifying multi-index sequences, multivariate formal power series and linear functionals on the ring of multivariate polynomials. In this setting, the recurrence relations are the elements of the kerne l$I$\sigma of the Hankel operator $H$\sigma associated to $$\sigma$$. We describe the correspondence between multi-index sequences with a Hankel operator of finite rank and Artinian Gorenstein Algebras. We show how the algebraic structure of the Artinian Gorenstein algebra $A$\sigma$$associated to the sequence$$\sigma yields the structure of the terms $\sigma\alpha$for all$$\alpha$ $\in$ N n$. This structure is explicitly given by a border basis of$A$\sigma$$, which is presented as a quotient of the polynomial ring$K[x 1 ,. .. , xn$] by the kernel$I$\sigma$$of the Hankel operator$H$\sigma$$. The algorithm provides generators of$I$\sigma$$constituting a border basis, pairwise orthogonal bases of$A$\sigma$$ and the tables of multiplication by the variables in these bases. It is an extension of Berlekamp-Massey-Sakata (BMS) algorithm, with improved complexity bounds. We present applications of the method to different problems such as the decomposition of functions into weighted sums of exponential functions, sparse interpolation, fast decoding of algebraic codes, computing the vanishing ideal of points, and tensor decomposition. Some benchmarks illustrate the practical behavior of the algorithm

Polynomial-Time Algorithms for Quadratic Isomorphism of Polynomials: The Regular Case

Let $\mathbf{f}=(f\_1,\ldots,f\_m)$ and $\mathbf{g}=(g\_1,\ldots,g\_m)$ be two sets of $m\geq 1$ nonlinear polynomials over $\mathbb{K}[x\_1,\ldots,x\_n]$ ($\mathbb{K}$ being a field). We consider the computational problem of finding -- if any -- an invertible transformation on the variables mapping $\mathbf{f}$ to $\mathbf{g}$. The corresponding equivalence problem is known as {\tt Isomorphism of Polynomials with one Secret} ({\tt IP1S}) and is a fundamental problem in multivariate cryptography. The main result is a randomized polynomial-time algorithm for solving {\tt IP1S} for quadratic instances, a particular case of importance in cryptography and somewhat justifying {\it a posteriori} the fact that {\it Graph Isomorphism} reduces to only cubic instances of {\tt IP1S} (Agrawal and Saxena). To this end, we show that {\tt IP1S} for quadratic polynomials can be reduced to a variant of the classical module isomorphism problem in representation theory, which involves to test the orthogonal simultaneous conjugacy of symmetric matrices. We show that we can essentially {\it linearize} the problem by reducing quadratic-{\tt IP1S} to test the orthogonal simultaneous similarity of symmetric matrices; this latter problem was shown by Chistov, Ivanyos and Karpinski to be equivalent to finding an invertible matrix in the linear space $\mathbb{K}^{n \times n}$ of $n \times n$ matrices over $\mathbb{K}$ and to compute the square root in a matrix algebra. While computing square roots of matrices can be done efficiently using numerical methods, it seems difficult to control the bit complexity of such methods. However, we present exact and polynomial-time algorithms for computing the square root in $\mathbb{K}^{n \times n}$ for various fields (including finite fields). We then consider \\#{\tt IP1S}, the counting version of {\tt IP1S} for quadratic instances. In particular, we provide a (complete) characterization of the automorphism group of homogeneous quadratic polynomials. Finally, we also consider the more general {\it Isomorphism of Polynomials} ({\tt IP}) problem where we allow an invertible linear transformation on the variables \emph{and} on the set of polynomials. A randomized polynomial-time algorithm for solving {\tt IP} when $\mathbf{f}=(x\_1^d,\ldots,x\_n^d)$ is presented. From an algorithmic point of view, the problem boils down to factoring the determinant of a linear matrix (\emph{i.e.}\ a matrix whose components are linear polynomials). This extends to {\tt IP} a result of Kayal obtained for {\tt PolyProj}.Comment: Published in Journal of Complexity, Elsevier, 2015, pp.3

Schubert polynomials and Arakelov theory of symplectic flag varieties

Let X be the flag variety of the symplectic group. We propose a theory of combinatorially explicit Schubert polynomials which represent the Schubert classes in the Borel presentation of the cohomology ring of X. We use these polynomials to describe the arithmetic Schubert calculus on X. Moreover, we give a method to compute the natural arithmetic Chern numbers on X, and show that they are all rational numbers.Comment: 22 pages; final versio