Improving Prolog programs: Refactoring for Prolog

Refactoring is an established technique from the object-oriented (OO) programming community to restructure code: it aims at improving software readability, maintainability and extensibility. Although refactoring is not tied to the OO-paradigm in particular, its ideas have not been applied to Logic Programming until now. This paper applies the ideas of refactoring to Prolog programs. A catalogue is presented listing refactorings classified according to scope. Some of the refactorings have been adapted from the OO-paradigm, while others have been specifically designed for Prolog. The discrepancy between intended and operational semantics in Prolog is also addressed by some of the refactorings. In addition, ViPReSS, a semi-automatic refactoring browser, is discussed and the experience with applying ViPReSS to a large Prolog legacy system is reported. The main conclusion is that refactoring is both a viable technique in Prolog and a rather desirable one.Comment: To appear in Theory and Practice of Logic Programming (TPLP

Experimental Biological Protocols with Formal Semantics

Both experimental and computational biology is becoming increasingly automated. Laboratory experiments are now performed automatically on high-throughput machinery, while computational models are synthesized or inferred automatically from data. However, integration between automated tasks in the process of biological discovery is still lacking, largely due to incompatible or missing formal representations. While theories are expressed formally as computational models, existing languages for encoding and automating experimental protocols often lack formal semantics. This makes it challenging to extract novel understanding by identifying when theory and experimental evidence disagree due to errors in the models or the protocols used to validate them. To address this, we formalize the syntax of a core protocol language, which provides a unified description for the models of biochemical systems being experimented on, together with the discrete events representing the liquid-handling steps of biological protocols. We present both a deterministic and a stochastic semantics to this language, both defined in terms of hybrid processes. In particular, the stochastic semantics captures uncertainties in equipment tolerances, making it a suitable tool for both experimental and computational biologists. We illustrate how the proposed protocol language can be used for automated verification and synthesis of laboratory experiments on case studies from the fields of chemistry and molecular programming

Working Notes from the 1992 AAAI Workshop on Automating Software Design. Theme: Domain Specific Software Design

The goal of this workshop is to identify different architectural approaches to building domain-specific software design systems and to explore issues unique to domain-specific (vs. general-purpose) software design. Some general issues that cut across the particular software design domain include: (1) knowledge representation, acquisition, and maintenance; (2) specialized software design techniques; and (3) user interaction and user interface

Research on knowledge representation, machine learning, and knowledge acquisition

Research in knowledge representation, machine learning, and knowledge acquisition performed at Knowledge Systems Lab. is summarized. The major goal of the research was to develop flexible, effective methods for representing the qualitative knowledge necessary for solving large problems that require symbolic reasoning as well as numerical computation. The research focused on integrating different representation methods to describe different kinds of knowledge more effectively than any one method can alone. In particular, emphasis was placed on representing and using spatial information about three dimensional objects and constraints on the arrangement of these objects in space. Another major theme is the development of robust machine learning programs that can be integrated with a variety of intelligent systems. To achieve this goal, learning methods were designed, implemented and experimented within several different problem solving environments

Ergonomic design improvement at Koko Minda Food Industries (M) Sdn. Bhd

Koko Minda Food Industries (M) Sdn. Bhd was founded and established on year 2010 and still operating until now. This company is founded by Mr. Salim bin Salleh after he retired from working with government on year 2009. He decided to open up Koko Minda Food Industries (M) Sdn. Bhd because he has desired to continue working after being retired from working due to his sickness. His daughter, Ms. Nurul Firdaus binti Salim also giving hands to help him and serve as the Director of Administration & Marketing to run Koko Minda Food Industries (M) Sdn. Bhd. This company is located at IKS Halal Hub Serkam, Merlimau, Malacca, Malaysia and will be relocated to a new factory which 200 meters from its current factory

Commentary on a British Geological Survey Computing Archive (1965-85)

An account of the emergence of computer methods in geology, as a background to a restricted archive of documents which chronicle their application in the British Geological Survey