Domain-Specific Acceleration and Auto-Parallelization of Legacy Scientific Code in FORTRAN 77 using Source-to-Source Compilation

Massively parallel accelerators such as GPGPUs, manycores and FPGAs represent a powerful and affordable tool for scientists who look to speed up simulations of complex systems. However, porting code to such devices requires a detailed understanding of heterogeneous programming tools and effective strategies for parallelization. In this paper we present a source to source compilation approach with whole-program analysis to automatically transform single-threaded FORTRAN 77 legacy code into OpenCL-accelerated programs with parallelized kernels. The main contributions of our work are: (1) whole-source refactoring to allow any subroutine in the code to be offloaded to an accelerator. (2) Minimization of the data transfer between the host and the accelerator by eliminating redundant transfers. (3) Pragmatic auto-parallelization of the code to be offloaded to the accelerator by identification of parallelizable maps and reductions. We have validated the code transformation performance of the compiler on the NIST FORTRAN 78 test suite and several real-world codes: the Large Eddy Simulator for Urban Flows, a high-resolution turbulent flow model; the shallow water component of the ocean model Gmodel; the Linear Baroclinic Model, an atmospheric climate model and Flexpart-WRF, a particle dispersion simulator. The automatic parallelization component has been tested on as 2-D Shallow Water model (2DSW) and on the Large Eddy Simulator for Urban Flows (UFLES) and produces a complete OpenCL-enabled code base. The fully OpenCL-accelerated versions of the 2DSW and the UFLES are resp. 9x and 20x faster on GPU than the original code on CPU, in both cases this is the same performance as manually ported code.Comment: 12 pages, 5 figures, submitted to "Computers and Fluids" as full paper from ParCFD conference entr

Type-driven automated program transformations and cost modelling for optimising streaming programs on FPGAs

In this paper we present a novel approach to program optimisation based on compiler-based type-driven program transformations and a fast and accurate cost/performance model for the target architecture. We target streaming programs for the problem domain of scientific computing, such as numerical weather prediction. We present our theoretical framework for type-driven program transformation, our target high-level language and intermediate representation languages and the cost model and demonstrate the effectiveness of our approach by comparison with a commercial toolchain

A compiler level intermediate representation based binary analysis system and its applications

Analyzing and optimizing programs from their executables has received a lot of attention recently in the research community. There has been a tremendous amount of activity in executable-level research targeting varied applications such as security vulnerability analysis, untrusted code analysis, malware analysis, program testing, and binary optimizations. The vision of this dissertation is to advance the field of static analysis of executables and bridge the gap between source-level analysis and executable analysis. The main thesis of this work is scalable static binary rewriting and analysis using compiler-level intermediate representation without relying on the presence of metadata information such as debug or symbolic information. In spite of a significant overlap in the overall goals of several source-code methods and executables-level techniques, several sophisticated transformations that are well-understood and implemented in source-level infrastructures have yet to become available in executable frameworks. It is a well known fact that a standalone executable without any meta data is less amenable to analysis than the source code. Nonetheless, we believe that one of the prime reasons behind the limitations of existing executable frameworks is that current executable frameworks define their own intermediate representations (IR) which are significantly more constrained than an IR used in a compiler. Intermediate representations used in existing binary frameworks lack high level features like abstract stack, variables, and symbols and are even machine dependent in some cases. This severely limits the application of well-understood compiler transformations to executables and necessitates new research to make them applicable. In the first part of this dissertation, we present techniques to convert the binaries to the same high-level intermediate representation that compilers use. We propose methods to segment the flat address space in an executable containing undifferentiated blocks of memory. We demonstrate the inadequacy of existing variable identification methods for their promotion to symbols and present our methods for symbol promotion. We also present methods to convert the physically addressed stack in an executable to an abstract stack. The proposed methods are practical since they do not employ symbolic, relocation, or debug information which are usually absent in deployed executables. We have integrated our techniques with a prototype x86 binary framework called \emph{SecondWrite} that uses LLVM as the IR. The robustness of the framework is demonstrated by handling executables totaling more than a million lines of source-code, including several real world programs. In the next part of this work, we demonstrate that several well-known source-level analysis frameworks such as symbolic analysis have limited effectiveness in the executable domain since executables typically lack higher-level semantics such as program variables. The IR should have a precise memory abstraction for an analysis to effectively reason about memory operations. Our first work of recovering a compiler-level representation addresses this limitation by recovering several higher-level semantics information from executables. In the next part of this work, we propose methods to handle the scenarios when such semantics cannot be recovered. First, we propose a hybrid static-dynamic mechanism for recovering a precise and correct memory model in executables in presence of executable-specific artifacts such as indirect control transfers. Next, the enhanced memory model is employed to define a novel symbolic analysis framework for executables that can perform the same types of program analysis as source-level tools. Frameworks hitherto fail to simultaneously maintain the properties of correct representation and precise memory model and ignore memory-allocated variables while defining symbolic analysis mechanisms. We exemplify that our framework is robust, efficient and it significantly improves the performance of various traditional analyses like global value numbering, alias analysis and dependence analysis for executables. Finally, the underlying representation and analysis framework is employed for two separate applications. First, the framework is extended to define a novel static analysis framework, \emph{DemandFlow}, for identifying information flow security violations in program executables. Unlike existing static vulnerability detection methods for executables, DemandFlow analyzes memory locations in addition to symbols, thus improving the precision of the analysis. DemandFlow proposes a novel demand-driven mechanism to identify and precisely analyze only those program locations and memory accesses which are relevant to a vulnerability, thus enhancing scalability. DemandFlow uncovers six previously undiscovered format string and directory traversal vulnerabilities in popular ftp and internet relay chat clients. Next, the framework is extended to implement a platform-specific optimization for embedded processors. Several embedded systems provide the facility of locking one or more lines in the cache. We devise the first method in literature that employs instruction cache locking as a mechanism for improving the average-case run-time of general embedded applications. We demonstrate that the optimal solution for instruction cache locking can be obtained in polynomial time. Since our scheme is implemented inside a binary framework, it successfully addresses the portability concern by enabling the implementation of cache locking at the time of deployment when all the details of the memory hierarchy are available