1,083 research outputs found
A centrality measure for cycles and subgraphs II
In a recent work we introduced a measure of importance for groups of vertices in a complex network. This centrality for groups is always between 0 and 1 and induces the eigenvector centrality over vertices. Furthermore, its value over any group is the fraction of all network flows intercepted by this group. Here we provide the rigorous mathematical constructions underpinning these results via a semi-commutative extension of a number theoretic sieve. We then established further relations between the eigenvector centrality and the centrality proposed here, showing that the latter is a proper extension of the former to groups of nodes. We finish by comparing the centrality proposed here with the notion of group-centrality introduced by Everett and Borgatti on two real-world networks: the Wolfe’s dataset and the protein-protein interaction network of the yeast Saccharomyces cerevisiae. In this latter case, we demonstrate that the centrality is able to distinguish protein complexe
Cycle-centrality in complex networks
Networks are versatile representations of the interactions between entities
in complex systems. Cycles on such networks represent feedback processes which
play a central role in system dynamics. In this work, we introduce a measure of
the importance of any individual cycle, as the fraction of the total
information flow of the network passing through the cycle. This measure is
computationally cheap, numerically well-conditioned, induces a centrality
measure on arbitrary subgraphs and reduces to the eigenvector centrality on
vertices. We demonstrate that this measure accurately reflects the impact of
events on strategic ensembles of economic sectors, notably in the US economy.
As a second example, we show that in the protein-interaction network of the
plant Arabidopsis thaliana, a model based on cycle-centrality better accounts
for pathogen activity than the state-of-art one. This translates into
pathogen-targeted-proteins being concentrated in a small number of triads with
high cycle-centrality. Algorithms for computing the centrality of cycles and
subgraphs are available for download
Returnability in complex directed networks (digraphs)
The concept of returnability is proposed for complex directed networks (digraphs). It can be seen as a generalization of the concept of reciprocity. Two measures of the returnability are introduced. We establish closed formulas for the calculation of the returnability measures, which are also related to the digraph spectrum. The two measures are calculated for simple examples of digraphs as well as for real-world complex directed networks and are compared with the reciprocity
Spectral and Dynamical Properties in Classes of Sparse Networks with Mesoscopic Inhomogeneities
We study structure, eigenvalue spectra and diffusion dynamics in a wide class
of networks with subgraphs (modules) at mesoscopic scale. The networks are
grown within the model with three parameters controlling the number of modules,
their internal structure as scale-free and correlated subgraphs, and the
topology of connecting network. Within the exhaustive spectral analysis for
both the adjacency matrix and the normalized Laplacian matrix we identify the
spectral properties which characterize the mesoscopic structure of sparse
cyclic graphs and trees. The minimally connected nodes, clustering, and the
average connectivity affect the central part of the spectrum. The number of
distinct modules leads to an extra peak at the lower part of the Laplacian
spectrum in cyclic graphs. Such a peak does not occur in the case of
topologically distinct tree-subgraphs connected on a tree. Whereas the
associated eigenvectors remain localized on the subgraphs both in trees and
cyclic graphs. We also find a characteristic pattern of periodic localization
along the chains on the tree for the eigenvector components associated with the
largest eigenvalue equal 2 of the Laplacian. We corroborate the results with
simulations of the random walk on several types of networks. Our results for
the distribution of return-time of the walk to the origin (autocorrelator)
agree well with recent analytical solution for trees, and it appear to be
independent on their mesoscopic and global structure. For the cyclic graphs we
find new results with twice larger stretching exponent of the tail of the
distribution, which is virtually independent on the size of cycles. The
modularity and clustering contribute to a power-law decay at short return
times
Characterization of complex networks: A survey of measurements
Each complex network (or class of networks) presents specific topological
features which characterize its connectivity and highly influence the dynamics
of processes executed on the network. The analysis, discrimination, and
synthesis of complex networks therefore rely on the use of measurements capable
of expressing the most relevant topological features. This article presents a
survey of such measurements. It includes general considerations about complex
network characterization, a brief review of the principal models, and the
presentation of the main existing measurements. Important related issues
covered in this work comprise the representation of the evolution of complex
networks in terms of trajectories in several measurement spaces, the analysis
of the correlations between some of the most traditional measurements,
perturbation analysis, as well as the use of multivariate statistics for
feature selection and network classification. Depending on the network and the
analysis task one has in mind, a specific set of features may be chosen. It is
hoped that the present survey will help the proper application and
interpretation of measurements.Comment: A working manuscript with 78 pages, 32 figures. Suggestions of
measurements for inclusion are welcomed by the author
Identifying Influential Nodes in Bipartite Networks Using the Clustering Coefficient
The identification of influential nodes in complex network can be very
challenging. If the network has a community structure, centrality measures may
fail to identify the complete set of influential nodes, as the hubs and other
central nodes of the network may lie inside only one community. Here we define
a bipartite clustering coefficient that, by taking differently structured
clusters into account, can find important nodes across communities
- …