A NeISS collaboration to develop and use e-infrastructure for large-scale social simulation

The National e-Infrastructure for Social Simulation (NeISS) project is focused on developing e-Infrastructure to support social simulation research. Part of NeISS aims to provide an interface for running contemporary dynamic demographic social simulation models as developed in the GENESIS project. These GENESIS models operate at the individual person level and are stochastic. This paper focuses on support for a simplistic demographic change model that has a daily time steps, and is typically run for a number of years. A portal based Graphical User Interface (GUI) has been developed as a set of standard portlets. One portlet is for specifying model parameters and setting a simulation running. Another is for comparing the results of different simulation runs. Other portlets are for monitoring submitted jobs and for interfacing with an archive of results. A layer of programs enacted by the portlets stage data in and submit jobs to a Grid computer which then runs a specific GENESIS model program executable. Once a job is submitted, some details are communicated back to a job monitoring portlet. Once the job is completed, results are stored and made available for download and further processing. Collectively we call the system the Genesis Simulator. Progress in the development of the Genesis Simulator was presented at the UK e- Science All Hands Meeting in September 2011 by way of a video based demonstration of the GUI, and an oral presentation of a working paper. Since then, an automated framework has been developed to run simulations for a number of years in yearly time steps. The demographic models have also been improved in a number of ways. This paper summarises the work to date, presents some of the latest results and considers the next steps we are planning in this work

Tool support for security-oriented virtual research collaborations

Collaboration is at the heart of e-Science and e-Research more generally. Successful collaborations must address both the needs of the end user researchers and the providers that make resources available. Usability and security are two fundamental requirements that are demanded by many collaborations and both concerns must be considered from both the researcher and resource provider perspective. In this paper we outline tools and methods developed at the National e-Science Centre (NeSC) that provide users with seamless, secure access to distributed resources through security-oriented research environments, whilst also allowing resource providers to define and enforce their own local access and usage policies through intuitive user interfaces. We describe these tools and illustrate their application in the ESRC-funded Data Management through e-Social Science (DAMES) and the JISC-funded SeeGEO projects

The Open Grid Computing Environments collaboration: portlets and services for science gateways

We review the efforts of the Open Grid Computing Environments collaboration. By adopting a general three-tiered architecture based on common standards for portlets and Grid Web services, we can deliver numerous capabilities to science gateways from our diverse constituent efforts. In this paper, we discuss our support for standards-based Grid portlets using the Velocity development environment. Our Grid portlets are based on abstraction layers provided by the Java CoG kit, which hide the differences of different Grid toolkits. Sophisticated services are decoupled from the portal container using Web service strategies. We describe advance information, semantic data, collaboration, and science application services developed by our consortium. Copyright © 2006 John Wiley & Sons, Ltd.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/56029/1/1078_ftp.pd

GUISET: A CONCEPTUAL DESIGN OF A GRID-ENABLED PORTAL FOR E-COMMERCE ON-DEMAND SERVICES

Conventional grid-enabled portal designs have been largely influenced by the usual functional requirements such as security requirements, grid resource requirements and job management requirements. However, the pay-as-you-use service provisioning model of utility computing platforms mean that additional requirements must be considered in order to realize effective grid-enabled portals design for such platforms. This work investigates those relevant additional requirements that must be considered for the design of grid-enabled portals for utility computing contexts. Based on a thorough review of literature, we identified a number of those relevant additional requirements, and developed a grid-enabled portal prototype for the Grid-based Utility Infrastructure for SMME-enabling Technology (GUISET) initiative – a utility computing platform. The GUISET portal was designed to cater for both the traditional grid requirements and some of the relevant additional requirements for utility computing contexts. The result of the evaluation of the GUISET portal prototype using a set of benchmark requirements (standards) revealed that it fulfilled the minimum requirements to be suitable for the utility context

Developing an open data portal for the ESA climate change initiative

We introduce the rationale for, and architecture of, the European Space Agency Climate Change Initiative (CCI) Open Data Portal (http://cci.esa.int/data/). The Open Data Portal hosts a set of richly diverse datasets – 13 “Essential Climate Variables” – from the CCI programme in a consistent and harmonised form and to provides a single point of access for the (>100 TB) data for broad dissemination to an international user community. These data have been produced by a range of different institutions and vary across both scientific and spatio-temporal characteristics. This heterogeneity of the data together with the range of services to be supported presented significant technical challenges. An iterative development methodology was key to tackling these challenges: the system developed exploits a workflow which takes data that conforms to the CCI data specification, ingests it into a managed archive and uses both manual and automatically generated metadata to support data discovery, browse, and delivery services. It utilises both Earth System Grid Federation (ESGF) data nodes and the Open Geospatial Consortium Catalogue Service for the Web (OGC-CSW) interface, serving data into both the ESGF and the Global Earth Observation System of Systems (GEOSS). A key part of the system is a new vocabulary server, populated with CCI specific terms and relationships which integrates OGC-CSW and ESGF search services together, developed as part of a dialogue between domain scientists and linked data specialists. These services have enabled the development of a unified user interface for graphical search and visualisation – the CCI Open Data Portal Web Presence

1st INCF Workshop on Global Portal Services for Neuroscience

The goal of this meeting was to map out existing portal services for neuroscience, identify their features and future plans, and outline opportunities for synergistic developments. The workshop discussed alternative formats of future global and integrated portal services

WS-PGRADE/gUSE in European Projects

Besides core project partners, the SCI-BUS project also supported several external user communities in developing and setting up customized science gateways. The focus was on large communities typically represented by other European research projects. However, smaller local efforts with the potential of generalizing the solution to wider communities were also supported. This chapter gives an overview of support activities related to user communities external to the SCI-BUS project. A generic overview of such activities is provided followed by the detailed description of three gateways developed in collaboration with European projects: the agINFRA Science Gateway for Workflows for agricultural research, the VERCE Science Gateway for seismology, and the DRIHM Science Gateway for weather research and forecasting