Computing Algebraic Matroids

An affine variety induces the structure of an algebraic matroid on the set of coordinates of the ambient space. The matroid has two natural decorations: a circuit polynomial attached to each circuit, and the degree of the projection map to each base, called the base degree. Decorated algebraic matroids can be computed via symbolic computation using Groebner bases, or through linear algebra in the space of differentials (with decorations calculated using numerical algebraic geometry). Both algorithms are developed here. Failure of the second algorithm occurs on a subvariety called the non-matroidal or NM- locus. Decorated algebraic matroids have widespread relevance anywhere that coordinates have combinatorial significance. Examples are computed from applied algebra, in algebraic statistics and chemical reaction network theory, as well as more theoretical examples from algebraic geometry and matroid theory.Comment: 15 pages; added link to references, note on page 1, and small formatting fixe

Support Sets in Exponential Families and Oriented Matroid Theory

The closure of a discrete exponential family is described by a finite set of equations corresponding to the circuits of an underlying oriented matroid. These equations are similar to the equations used in algebraic statistics, although they need not be polynomial in the general case. This description allows for a combinatorial study of the possible support sets in the closure of an exponential family. If two exponential families induce the same oriented matroid, then their closures have the same support sets. Furthermore, the positive cocircuits give a parameterization of the closure of the exponential family.Comment: 27 pages, extended version published in IJA

Isotropical Linear Spaces and Valuated Delta-Matroids

The spinor variety is cut out by the quadratic Wick relations among the principal Pfaffians of an n x n skew-symmetric matrix. Its points correspond to n-dimensional isotropic subspaces of a 2n-dimensional vector space. In this paper we tropicalize this picture, and we develop a combinatorial theory of tropical Wick vectors and tropical linear spaces that are tropically isotropic. We characterize tropical Wick vectors in terms of subdivisions of Delta-matroid polytopes, and we examine to what extent the Wick relations form a tropical basis. Our theory generalizes several results for tropical linear spaces and valuated matroids to the class of Coxeter matroids of type D

Generic and special constructions of pure O-sequences

It is shown that the h-vectors of Stanley-Reisner rings of three classes of matroids are pure O-sequences. The classes are (a) matroids that are truncations of other matroids, or more generally of Cohen-Macaulay complexes, (b) matroids whose dual is (rank + 2)-partite, and (c) matroids of Cohen-Macaulay type at most five. Consequences for the computational search for a counterexample to a conjecture of Stanley are discussed.Comment: 16 pages, v2: various small improvements, accepted by Bulletin of the London Math. Societ

On perturbations of highly connected dyadic matroids

Geelen, Gerards, and Whittle [3] announced the following result: let $q = p^k$ be a prime power, and let $\mathcal{M}$ be a proper minor-closed class of $\mathrm{GF}(q)$-representable matroids, which does not contain $\mathrm{PG}(r-1,p)$ for sufficiently high $r$. There exist integers $k, t$ such that every vertically $k$-connected matroid in $\mathcal{M}$ is a rank-$(\leq t)$ perturbation of a frame matroid or the dual of a frame matroid over $\mathrm{GF}(q)$. They further announced a characterization of the perturbations through the introduction of subfield templates and frame templates. We show a family of dyadic matroids that form a counterexample to this result. We offer several weaker conjectures to replace the ones in [3], discuss consequences for some published papers, and discuss the impact of these new conjectures on the structure of frame templates.Comment: Version 3 has a new title and a few other minor corrections; 38 pages, including a 6-page Jupyter notebook that contains SageMath code and that is also available in the ancillary file