Clustering Algorithms for Scale-free Networks and Applications to Cloud Resource Management

In this paper we introduce algorithms for the construction of scale-free networks and for clustering around the nerve centers, nodes with a high connectivity in a scale-free networks. We argue that such overlay networks could support self-organization in a complex system like a cloud computing infrastructure and allow the implementation of optimal resource management policies.Comment: 14 pages, 8 Figurs, Journa

An Energy Aware and Secure MAC Protocol for Tackling Denial of Sleep Attacks in Wireless Sensor Networks

Wireless sensor networks which form part of the core for the Internet of Things consist of resource constrained sensors that are usually powered by batteries. Therefore, careful energy awareness is essential when working with these devices. Indeed,the introduction of security techniques such as authentication and encryption, to ensure confidentiality and integrity of data, can place higher energy load on the sensors. However, the absence of security protection c ould give room for energy drain attacks such as denial of sleep attacks which have a higher negative impact on the life span ( of the sensors than the presence of security features. This thesis, therefore, focuses on tackling denial of sleep attacks from two perspectives A security perspective and an energy efficiency perspective. The security perspective involves evaluating and ranking a number of security based techniques to curbing denial of sleep attacks. The energy efficiency perspective, on the other hand, involves exploring duty cycling and simulating three Media Access Control ( protocols Sensor MAC, Timeout MAC andTunableMAC under different network sizes and measuring different parameters such as the Received Signal Strength RSSI) and Link Quality Indicator ( Transmit power, throughput and energy efficiency Duty cycling happens to be one of the major techniques for conserving energy in wireless sensor networks and this research aims to answer questions with regards to the effect of duty cycles on the energy efficiency as well as the throughput of three duty cycle protocols Sensor MAC ( Timeout MAC ( and TunableMAC in addition to creating a novel MAC protocol that is also more resilient to denial of sleep a ttacks than existing protocols. The main contributions to knowledge from this thesis are the developed framework used for evaluation of existing denial of sleep attack solutions and the algorithms which fuel the other contribution to knowledge a newly developed protocol tested on the Castalia Simulator on the OMNET++ platform. The new protocol has been compared with existing protocols and has been found to have significant improvement in energy efficiency and also better resilience to denial of sleep at tacks Part of this research has been published Two conference publications in IEEE Explore and one workshop paper

Markov Decision Processes with Applications in Wireless Sensor Networks: A Survey

Wireless sensor networks (WSNs) consist of autonomous and resource-limited devices. The devices cooperate to monitor one or more physical phenomena within an area of interest. WSNs operate as stochastic systems because of randomness in the monitored environments. For long service time and low maintenance cost, WSNs require adaptive and robust methods to address data exchange, topology formulation, resource and power optimization, sensing coverage and object detection, and security challenges. In these problems, sensor nodes are to make optimized decisions from a set of accessible strategies to achieve design goals. This survey reviews numerous applications of the Markov decision process (MDP) framework, a powerful decision-making tool to develop adaptive algorithms and protocols for WSNs. Furthermore, various solution methods are discussed and compared to serve as a guide for using MDPs in WSNs

MOLNs: A cloud platform for interactive, reproducible and scalable spatial stochastic computational experiments in systems biology using PyURDME

Computational experiments using spatial stochastic simulations have led to important new biological insights, but they require specialized tools, a complex software stack, as well as large and scalable compute and data analysis resources due to the large computational cost associated with Monte Carlo computational workflows. The complexity of setting up and managing a large-scale distributed computation environment to support productive and reproducible modeling can be prohibitive for practitioners in systems biology. This results in a barrier to the adoption of spatial stochastic simulation tools, effectively limiting the type of biological questions addressed by quantitative modeling. In this paper, we present PyURDME, a new, user-friendly spatial modeling and simulation package, and MOLNs, a cloud computing appliance for distributed simulation of stochastic reaction-diffusion models. MOLNs is based on IPython and provides an interactive programming platform for development of sharable and reproducible distributed parallel computational experiments