Phylogenetic tree analysis of the <i>L</i>. <i>ruminis</i> genomes.

Abstract

<p>Unrooted phylogenies of the <i>L</i>. <i>ruminis</i> genomes were based on the multiple sequence alignment of core proteins and constructed with the neighbor-joining tree-building algorithm (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0175541#sec002" target="_blank">Materials and Methods</a> for details). Names of the <i>L</i>. <i>ruminis</i> strains from which each genome is derived are shown. Four distinct phyletic clades were identified based on host-gut source (human, bovine, porcine, or equine) and are indicated accordingly.</p

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