Additional file 6: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Correlation analysis between AluS methylation and expression level of ASD subgroup S. (PDF 333 kb

Additional file 1: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Demographic information of LCLs used in this study. (DOC 73 kb

Additional file 3: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

List of the overlapping genes. (DOC 118 kb

Additional file 2: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Association analysis between the DEGs in ASD from GSE15402 and the human Alu-inserted genes lists when ASD individuals were sub-grouped based on ADI-R scores. The comparisons were performed for five types of Alu insertions, including exonized, exonic, intronic, promoter and all types. The Fisher’s exact test P value and number of DEGs are shown. (DOC 46 kb

Additional file 5: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Correlation analysis between AluS methylation and expression level of ASD subgroup L. (PDF 329 kb

Additional file 4: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder

Levels and patterns of Alu methylation in each individual. (DOC 98 kb