8 research outputs found

    Regional plots showing meta-analyses results for rDR-L.

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    <p>(A) Results with the top associated SNP in the <i>APOE</i> region labeled. Two conditional meta-analyses were performed for rDR-L, (B) estimating the association with the <i>APOE</i> SNP shown (rs769449), conditioning on the top <i>TOMM40</i> SNP (rs2075650); and (C) estimating the association with the <i>TOMM40</i> SNP shown (rs2075650), conditioning on the top <i>APOE</i> SNP (rs769449). The y-axis shows -log<sub>10</sub> P-values; x-axis shows position of genes on chromosome 19 with SNPs 400-kb in both directions of the SNP of interest. The diamond represents the top SNP of interest. The circles represent each genotyped SNP in this region; the circle color indicates pairwise linkage disequilibrium (LD) in relation to the top SNP (calculated from hg19/1000 Genomes Nov 2014 EUR). The solid (blue) line indicates the recombination rate.</p

    Regional plots showing results of the meta-analyses of IR-C.

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    <p>(A) Meta-analysis results with the top SNP in <i>TOMM40</i> (rs157582) shown; (B) results when estimating the association with the <i>TOMM40</i> SNP shown (rs157582), conditioning on the top <i>APOE</i> SNP (rs769449); and (C) results when estimating the association with the <i>APOE</i> SNP (rs769449), conditioning on the top <i>TOMM40</i> SNP (rs157582). The y-axis shows -log<sub>10</sub> P-values; x-axis shows position of genes on chromosome 19 with SNPs 400-kb in both directions of the SNP of interest. The diamond represents the top SNP of interest. The circles represent each genotyped SNP in this region; the circle color indicates pairwise linkage disequilibrium (LD) in relation to the top SNP (calculated from hg19/1000 Genomes Nov 2014 EUR). The solid (blue) line indicates the recombination rate.</p

    P-values for all 1,198,956 SNP associations from GWAS on the HRS genetic sample.

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    <p>(A) Level of Immediate Recall (IR-L); (B) Change in Immediate Recall (IR-C); (C) Level of Residualized Delayed Recall (rDR-L); (D) Change in Residualized Delayed Recall (rDR-C). For these figures, the upper (red) horizontal line demarcates the threshold of p = -log(5.0x10<sup>-08</sup>) and the lower (blue) horizontal line demarcates p = -log(1x10<sup>-05</sup>). SNPs are arranged by their chromosomal position (x-axis).</p
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