Evidence for hybridization and introgression within a species-rich oak (spp.) community-1

<p><b>Copyright information:</b></p><p>Taken from "Evidence for hybridization and introgression within a species-rich oak (spp.) community"</p><p>http://www.biomedcentral.com/1471-2148/7/218</p><p>BMC Evolutionary Biology 2007;7():218-218.</p><p>Published online 10 Nov 2007</p><p>PMCID:PMC2244923.</p><p></p>iduals are indicated by arrows and filled forms. Shape and colour of symbols correspond to the species they mostly resemble

CpDNA haplotype distribution of beech in Greece

<p>A map of Greece and European Turkey with the distribution of cpDNA haplotpyes of Fagus sylvatica. The description of the haplotypes can be found in http://dx.doi.org/10.6084/m9.figshare.105888. This figure is taken from the article "High chloroplast haplotype diversity in Greek populations of beech (Fagus sylvatica L.), by S.Hatziskakis, A.C.Papageorgiou, O.Gailing, R.Finkeldey, Plant Biology, Volume 11, Issue 3, pages 425–433, May 2009".</p

Patterns of genetic diversity of Fagus sylvatica L. in Rodopi Mountains of N.E. Greece

<p>The taxonomic classification of European beech has been lately subject of long scientific discussions. Genetic variation at AFLPs, chloroplast microsatellites and variation in leaf morphology have been analysed in four populations of F. sylvatica in the greek Rodopi Mountains. The analysis of morphological traits reveals differences between the western and the eastern part of the Rodopi Mountains. Moreover, high levels of haplotype diversity were observed within populations, while in central and western Europe no variation at cpDNA markers was detected. Clinal variation patterns have occurred at both morphological and molecular markers, with the variation increasing from the west to the east. Differentiation among populations was found, as expected, stronger at maternaly inherited cpDNA. The results obtained in this study, can be explained either by considering the greek Rodopi an introgression zone between subspecies sylvatica and subspecies orientalis or by the existance of a main glacial refugial area. These scenarios are not mutually exclusive.</p> <p> </p> <p>Poster presented during the Systematics Conference 2008, Göttingen, Germany.</p

Table of beech cpDNA haplotypes: fragment length of 3 primer sets

<p>This is a table describing the cpDNA haplotypes found in beech (<em>Fagus sylvatica</em>) populations in Greece and European Turkey. Three primer sets were used (ccmp4, 7 and 10) and the length of the fragments is listed for each haplotype. This table is taken from the article "High chloroplast haplotype diversity in Greek populations of beech (Fagus sylvatica L.), by S.Hatziskakis, A.C.Papageorgiou, O.Gailing, R.Finkeldey, Plant Biology, Volume 11, Issue 3, pages 425–433, May 2009".</p

Conservation status of each species used in this study.

(DOCX)</p

Heat maps of interspecific genetic distances between Lamiaceae species sampled in Sumatra, Indonesia.

A- Interspecific genetic distances estimated using matK, B—rbcL and C- ITS regions. Scale bar is adjusted to the maximum genetic distance value of each marker.</p

Additional file 7: Table S5. of Quantitative trait locus mapping of Populus bark features and stem diameter

The 90th percentile candidate genes within the ninety four QTL detected in Populus Family 52–124. Physical localization, annotation and expression profile of gene models in the 90th percentile with high expression within LOD peaks for each QTL interval for all traits. (XLSX 78 kb

Additional file 3: FigureS2. of Quantitative trait locus mapping of Populus bark features and stem diameter

Frequency distribution for bark texture, diameter and bark thickness (a, b, and c, respectively) across Oregon and West Virginia sites and various years in Populus Family 52–124. NOTE: All supporting tables, except for Table S3, are in excel format submitted as separate files. (TIFF 209 kb

Maximum likelihood tree based on the chloroplast loci <i>matK</i> and <i>rbcL</i> of Lamiaceae.

The tips of the tree labels display the species IDs. The subfamilies of the Lamiaceae family are colour highlighted. * Highlights juvenile specimens. (TIF)</p

Additional file 5: Table S3. of Quantitative trait locus mapping of Populus bark features and stem diameter

Number of candidate genes detected across QTL for the three traits. Note: The number of genes for each trait in QTL clusters based on MQM mapping with cofactor selection, sorted by significance and reproducibility. (DOCX 13 kb