Whole genome shotgun sequencing of Mycobacterium abscessus M156, an emerging clinical pathogen in Malaysia

Mycobacterium abscessus is an emerging clinical pathogen commonly associated with non-tuberculous mycobacterial infections. We report herein the draft genome of M. abscessus strain M156

Overview of MabsBase.

<p>(A) The database overview which displays the main list of all strains and information such as genome size, genome identity and coverage etc., organized in columns. (B) ORF list of a specific strain. (C) Detailed information of an ORF with visualization in JBrowse.</p

Core genome SNPs-based phylogenetic tree.

<p>All isolates were clustered into three distinct groups. Countries where the sample collection originated are indicated in parentheses. Concatenated core genome SNPs sequences were aligned and phylogenetic inferences obtained using the maximum-likelihood method within the MEGA 5.1 software. Numbers at the nodes are percentages of bootstrap values obtained by repeating the analysis 1,000 times to generate a majority consensus tree. The scale bar represents a 6% sequence difference.</p

A diagram showing the overview of the functionalities in MabsBase.

<p>A diagram showing the overview of the functionalities in MabsBase.</p