Density and Abundance of Wolverines in Glacier National Park, Montana, USA

Wolverines (Gulo gulo) are a rare mustelid carnivore inhabiting the northern US Rocky Mountains. Because they may be closely tied to areas with persistent snow pack, and because these areas may diminish due to climate change, wolverines are a candidate for listing under the U.S. Endangered Species Act. Glacier National Park (GNP) contains over 4,000 km2 of rugged mountain terrain straddling the Continental Divide immediately south of the U.S./Canada border. Much of this terrain is considered wolverine habitat, and GNP may contain a significant portion of the U.S. wolverine population.  GNP, in collaboration with the USDA Forest Service Rocky Mountain Research Station, and following on the heels of a telemetry-based research project conducted in GNP 2003-2008, began a non-invasive DNA-based wolverine population monitoring program in 2009. The objectives of the program were to identify effective methods of non-invasive monitoring and then use these to estimate population size and density.  Using primarily volunteer labor, we began by placing baited hair-snag stations along lakeshores where we felt we might intercept wolverines during winter 2009. This evolved into a systematic survey of the park using a 10 x 10 km sampling grid over putative wolverine habitat during the winters of 2011 and 2012. We then applied a multi-faceted mark-recapture analysis to the accumulated data.  Here, we present the findings from this effort, including estimates of population size, density, and trend, and insights concerning wolverine population monitoring

Age-related changes in the relationship between alcohol use and violence from early adolescence to young adulthood

BACKGROUND: Despite the accumulation of studies examining the link between alcohol use and violence, no studies to our knowledge have systematically set out to detect age-related differences in these relationships. This limitation inhibits important insights into the stability of the relationship between alcohol use and violence among youth across varying ages. METHOD: Study findings are based on repeated, cross-sectional data collected annually as part of the National Survey on Drug Use and Health between 2002 and 2013. We combined a series of nationally representative cross-sections to provide a multi-year string of data that, in effect, reflects a nationally representative non-traditional cohort. We conducted logistic regression analyses to examine the cross-sectional association between non-binge and binge drinking and violent attacks among youth between ages 12 (2002) and 24/25 (2013). RESULTS: With respect to the association between non-binge alcohol use and violence, the only significant relationship identified—while controlling for sociodemographic and drug use factors—was for youth at age 13 (2003; OR = 1.97, 95% CI = 1.04–3.72). For binge drinking, we identified a distinct pattern of results. Controlling for sociodemographic, drug use factors, and school enrollment, binge drinking was significantly associated with violence between ages 13 (2003) and 20 (2010) with the largest odds ratios observed during the early adolescent period. CONCLUSIONS: Non-binge drinking is associated with violent behavior at age 13. Binge drinking was found to be associated with violence among youth through age 20; however, the relationship dissipates when youth arrive at the legal drinking age of 21

Wildlife Scientists and Wilderness Managers Finding Common Ground with Noninvasive and Nonintrusive Sampling of Wildlife

Iconic wildlife species such as grizzly bears, wolves, lynx, and wolverines are often associated with wilderness. Wilderness may provide some of the last, and best, remaining places for such species because wilderness can offer long-term legislated protection, relatively large areas, and remoteness (Mattson 1997). Indeed, the word wilderness in its original form literally means “place of wild beasts” (Nash 1982). Despite this natural fit between wilderness and wildlife, simply drawing a boundary around an area such as wilderness does not assure the protection and persistence of wildlife either inside the area or across the broader landscape (Landres et al. 1998). Only by understanding where such species occur and how their populations are faring can we know if wilderness is aiding in the role of sustaining wildlif

Gene Flow in Complex Landscapes: Testing Multiple Hypotheses with Causal Modeling.

Predicting population-level effects of landscape change depends on identifying factors that influence population connectivity in complex landscapes. However, most putative movement corridors and barriers have not been based on empirical data. In this study, we identify factors that influence connectivity by comparing patterns of genetic similarity among 146 black bears (Ursus americanus), sampled across a 3,000-km2 study area in northern Idaho, with 110 landscape-resistance hypotheses. Genetic similarities were based on the pairwise percentage dissimilarity among all individuals based on nine microsatellite loci (average expected heterozygosityp0.79). Landscape-resistance hypotheses describe a range of potential relationships between movement cost and land cover, slope, elevation, roads, Euclidean distance, and a putative movement barrier. These hypotheses were divided into seven organizational models in which the influences of barriers, distance, and landscape features were statistically separated using partial Mantel tests. Only one of the competing organizational models was fully supported: patterns of genetic structure are primarily related to landscape gradients of land cover and elevation. The alternative landscape models, isolation by barriers and isolation by distance, are not supported. In this black bear population, gene flow is facilitated by contiguous forest cover at middle elevations

Breed Locally, Disperse Globally: Fine-Scale Genetic Structure Despite Landscape-Scale Panmixia in a Fire-Specialist

An exciting advance in the understanding of metapopulation dynamics has been the investigation of how populations respond to ephemeral patches that go \u27extinct\u27 during the lifetime of an individual. Previous research has shown that this scenario leads to genetic homogenization across large spatial scales. However, little is known about fine-scale genetic structuring or how this changes over time in ephemeral patches. We predicted that species that specialize on ephemeral habitats will delay dispersal to exploit natal habitat patches while resources are plentiful and thus display fine-scale structure. To investigate this idea, we evaluated the effect of frequent colonization of ephemeral habitats on the fine-scale genetic structure of a fire specialist, the black-backed woodpecker (Picoides arcticus) and found a pattern of fine-scale genetic structure. We then tested for differences in spatial structure between sexes and detected a pattern consistent with male-biased dispersal. We also detected a temporal increase in relatedness among individuals within newly burned forest patches. Our results indicate that specialist species that outlive their ephemeral patches can accrue significant fine-scale spatial structure that does not necessarily affect spatial structure at larger scales. This highlights the importance of both spatial and temporal scale considerations in both sampling and data interpretation of molecular genetic results

Immigration as a Compensatory Mechanism to Offset Harvest Mortality in Harvested Wolf Populations

In less than a decade the U.S. Northern Rocky Mountain gray wolf (Canis lupus) population has experienced large shifts in management practices, from federal protection under the Endangered Species Act to increasingly liberal hunting and trapping seasons in many portions of their range after delisting.  As a result, there is interest in how current wolf management practices will affect this population over time.  Recent research suggests wolf pup recruitment in central Idaho has declined since harvest was initiated, yet wolf densities appear stable in many regions of the state, suggesting other compensatory mechanisms are offsetting the effects of harvest mortality.  Our objective was to evaluate immigration as a compensatory mechanism that may offset the effects of harvest mortality and facilitate population persistence in a heavily harvested wolf population.  Using noninvasively sampled DNA we identified dispersers into two focal study areas in central Idaho prior to and after harvest was initiated.  We measured genetic relatedness within and among wolf packs using three different metrics to assess how immigration has changed with changing management practices.  Our results suggest that at current harvest rates immigration is not acting as a compensatory mechanism to offset the effects of harvest mortality.  Local dispersal may be unaffected by harvest pressure whereas harvest has negative effects on long-distance dispersal.  Our research can help managers consider the effects of immigration on local wolf populations when making harvest management decisions

Sex-Biased Gene Flow Among Elk in the Greater Yellowstone Ecosystem

We quantified patterns of population genetic structure to help understand gene flow among elk populations across the Greater Yellowstone Ecosystem. We sequenced 596 base pairs of the mitochondrial control region of 380 elk from eight populations. Analysis revealed high mitochondrial DNA variation within populations, averaging 13.0 haplotypes with high mean gene diversity (0.85). The genetic differentiation among populations for mitochondrial DNA was relatively high (FST = 0.161; P = 0.001) compared to genetic differentiation for nuclear microsatellite data (FST = 0.002; P = 0.332), which suggested relatively low female gene flow among populations. The estimated ratio of male to female gene flow (mm/mf = 46) was among the highest we have seen reported for large mammals. Genetic distance (for mitochondrial DNA pairwise FST) was not significantly correlated with geographic (Euclidean) distance between populations (Mantel’s r = 0.274, P = 0.168). Large mitochondrial DNA genetic distances (e.g., FST . 0.2) between some of the geographically closest populations (,65 km) suggested behavioral factors and/or landscape features might shape female gene flow patterns. Given the strong sex-biased gene flow, future research and conservation efforts should consider the sexes separately when modeling corridors of gene flow or predicting spread of maternally transmitted diseases. The growing availability of genetic data to compare male vs. female gene flow provides many exciting opportunities to explore the magnitude, causes, and implications of sex-biased gene flow likely to occur in many species

Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore

<p>Abstract</p> <p>Background</p> <p>Science-based wildlife management relies on genetic information to infer population connectivity and identify conservation units. The most commonly used genetic marker for characterizing animal biodiversity and identifying maternal lineages is the mitochondrial genome. Mitochondrial genotyping figures prominently in conservation and management plans, with much of the attention focused on the non-coding displacement ("D") loop. We used massively parallel multiplexed sequencing to sequence complete mitochondrial genomes from 40 fishers, a threatened carnivore that possesses low mitogenomic diversity. This allowed us to test a key assumption of conservation genetics, specifically, that the D-loop accurately reflects genealogical relationships and variation of the larger mitochondrial genome.</p> <p>Results</p> <p>Overall mitogenomic divergence in fishers is exceedingly low, with 66 segregating sites and an average pairwise distance between genomes of 0.00088 across their aligned length (16,290 bp). Estimates of variation and genealogical relationships from the displacement (<it>D</it>) loop region (299 bp) are contradicted by the complete mitochondrial genome, as well as the protein coding fraction of the mitochondrial genome. The sources of this contradiction trace primarily to the near-absence of mutations marking the D-loop region of one of the most divergent lineages, and secondarily to independent (recurrent) mutations at two nucleotide position in the D-loop amplicon.</p> <p>Conclusions</p> <p>Our study has two important implications. First, inferred genealogical reconstructions based on the fisher D-loop region contradict inferences based on the entire mitogenome to the point that the populations of greatest conservation concern cannot be accurately resolved. Whole-genome analysis identifies Californian haplotypes from the northern-most populations as highly distinctive, with a significant excess of amino acid changes that may be indicative of molecular adaptation; D-loop sequences fail to identify this unique mitochondrial lineage. Second, the impact of recurrent mutation appears most acute in closely related haplotypes, due to the low level of evolutionary signal (unique mutations that mark lineages) relative to evolutionary noise (recurrent, shared mutation in unrelated haplotypes). For wildlife managers, this means that the populations of greatest conservation concern may be at the highest risk of being misidentified by D-loop haplotyping. This message is timely because it highlights the new opportunities for basing conservation decisions on more accurate genetic information.</p