24 research outputs found
Additional file 6 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 6. SVs that are hidden to aligners β Extended analysis. Contains Fig. S5, S6, and S7
Additional file 15 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 15. Review history
Additional file 13 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 13. Fuzzy inference of edges from MEMs. Contains Fig. S15
Additional file 3 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 3. Unfolded matrices and full graphs for Fig. 1 of themain text. Contains Fig. S2 and S3
Additional file 1 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 1. Breakends versus Breakpoints
Additional file 9 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 9. The sentinel vertex. Contains Fig. S11 and Table S1
Additional file 12 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 12. Detailed description of overlap-elimination. Contains Fig. S14
Additional file 5 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 5. Description of the SV caller prototype and benchmarking environment
Additional file 10 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 10. Ambiguities inherent to basic SV. Contains Fig. S12
Additional file 4 of MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from reads
Additional file 4. Experimental setup for the generation of nested genomic rearrangements. Contains Fig. S4