Addressing the nitrogen problem in sugarcane production to reduce pollution of the Great Barrier Reef

The N pollution footprint of sugarcane cropping is large due to inefficiencies caused by mismatched N supply and crop N demand over sugarcane’s long N accumulation phase. The Great Barrier Reef lagoon receives excessive N loads that contribute to the rapidly declining reef health. Exceeding international average nitrous oxide emission rates several fold, sugarcane soils contribute significantly to Australia’s agricultural emissions. Nitrogen pollution reduction schemes over recent decades have mostly targeted reducing N fertiliser rates in line with expected yields and improving soil quality. Overall, these measures have not resulted in the desired N pollution reduction and further innovation is needed to address this problem. We present research that aims to aid agronomic innovation with (i) next-generation fertilisers that are based on repurposed nutrient-rich wastes and sorbent materials to better match N supply and crop demand and to improve soil function and carbon levels, (ii) understanding of soil N cycling and microbial processes, (iii) legume companion cropping as a source of biologically fixed N, and (iv) genetic improvement of sugarcane that more effectively captures and uses N. We conclude that evidence-based innovation has to support crop growers across climate and soil gradients in the 400,000 hectares of catchments of the Great Barrier Reef. This should include investment into new technologies to support ecologically-sound agriculture and a circular economy without waste and pollution

The dynamic centres of infrared-dark clouds and the formation of cores

High-mass stars have an enormous influence on the evolution of the interstellar medium in galaxies, so it is important that we understand how they form. We examine the central clumps within a sample of seven infrared-dark clouds (IRDCs) with a range of masses and morphologies. We use 1-pc-scale observations from the Northern Extended Millimeter Array (NOEMA) and the IRAM 30m telescope to trace dense cores with 2.8-mm continuum, and gas kinematics in C18O, HCO+, HNC, and N2H+ (J = 1–0). We supplement our continuum sample with six IRDCs observed at 2.9 mm with the Atacama Large Millimeter/submillimeter Array (ALMA), and examine the relationships between core- and clump-scale properties. We have developed a fully automated multiple-velocity component hyperfine line-fitting code called MWYDYN which we employ to trace the dense gas kinematics in N2H+ (1–0), revealing highly complex and dynamic clump interiors. We find that parsec-scale clump mass is the most important factor driving the evolution; more massive clumps are able to concentrate more mass into their most massive cores – with a log-normally distributed efficiency of around 9 per cent – in addition to containing the most dynamic gas. Distributions of linewidths within the most massive cores are similar to the ambient gas, suggesting that they are not dynamically decoupled, but are similarly chaotic. A number of studies have previously suggested that clumps are globally collapsing; in such a scenario, the observed kinematics of clump centres would be the direct result of gravity-driven mass inflows that become ever more complex as the clumps evolve, which in turn leads to the chaotic mass growth of their core populations

Insights into the high-energy γ-ray emission of Markarian 501 from extensive multifrequency observations in the Fermi era

We report on the γ-ray activity of the blazar Mrk 501 during the first 480 days of Fermi operation. We find that the average Large Area Telescope (LAT) γ-ray spectrum of Mrk 501 can be well described by a single power-law function with a photon index of 1.78 ± 0.03. While we observe relatively mild flux variations with the Fermi-LAT (within less than a factor of two), we detect remarkable spectral variability where the hardest observed spectral index within the LAT energy range is 1.52 ± 0.14, and the softest one is 2.51 ± 0.20. These unexpected spectral changes do not correlate with the measured flux variations above 0.3 GeV. In this paper, we also present the first results from the 4.5 month long multifrequency campaign (2009 March 15-August 1) on Mrk 501, which included the Very Long Baseline Array (VLBA), Swift, RXTE, MAGIC, and VERITAS, the F-GAMMA, GASP-WEBT, and other collaborations and instruments which provided excellent temporal and energy coverage of the source throughout the entire campaign. The extensive radio to TeV data set from this campaign provides us with the most detailed spectral energy distribution yet collected for this source during its relatively low activity. The average spectral energy distribution of Mrk 501 is well described by the standard one-zone synchrotron self-Compton (SSC) model. In the framework of this model, we find that the dominant emission region is characterized by a size ≲0.1 pc (comparable within a factor of few to the size of the partially resolved VLBA core at 15-43 GHz), and that the total jet power (≃1044 erg s-1) constitutes only a small fraction (∼10-3) of the Eddington luminosity. The energy distribution of the freshly accelerated radiating electrons required to fit the time-averaged data has a broken power-law form in the energy range 0.3 GeV-10 TeV, with spectral indices 2.2 and 2.7 below and above the break energy of 20 GeV. We argue that such a form is consistent with a scenario in which the bulk of the energy dissipation within the dominant emission zone of Mrk 501 is due to relativistic, proton-mediated shocks. We find that the ultrarelativistic electrons and mildly relativistic protons within the blazar zone, if comparable in number, are in approximate energy equipartition, with their energy dominating the jet magnetic field energy by about two orders of magnitude. © 2011. The American Astronomical Society

Evaluation of dye-based assay for mannuronan 5′-epimerase

Alginates, ten other polysaccharides, and cell-wall preparations from Porphyra yezoensis are covalently dyed by Reactive Black 5. Dyed alginates resist cleavage by active preparations of guluronate lyase, indicating that dye-based assay cannot replace ultraviolet spectrophotometry in the guluronate lyase-linked assay for polymannuronan 5′-epimerase

Expressed sequence tags (ESTs) from the marine red alga Gracilaria gracilis

Expressed sequence tags (ESTs) are partial sequences of cDNAs, and can be used to characterize gene expression in organisms or tissues. We have constructed a 200-sequence EST database from vegetative thalli of Gracilaria gracilis, the first ESTs reported from any alga. This database contains recognizable ESTs corresponding to genes of carbohydrate metabolism (seven), amino acid metabolism (three), photosynthesis (five), nucleic acid synthesis, repair and processing (three), protein synthesis (14), protein degradation (six), cellular maintenance and stress response (three), other identifiable protein-coding genes (13) and 146 sequences for which significant matches were not found in existing sequence databases. We have already used this EST database to recover genes of carbohydrate biosynthesis from G. gracilis