swTVM: Exploring the Automated Compilation for Deep Learning on Sunway Architecture

The flourish of deep learning frameworks and hardware platforms has been demanding an efficient compiler that can shield the diversity in both software and hardware in order to provide application portability. Among the exiting deep learning compilers, TVM is well known for its efficiency in code generation and optimization across diverse hardware devices. In the meanwhile, the Sunway many-core processor renders itself as a competitive candidate for its attractive computational power in both scientific and deep learning applications. This paper combines the trends in these two directions. Specifically, we propose swTVM that extends the original TVM to support ahead-of-time compilation for architecture requiring cross-compilation such as Sunway. In addition, we leverage the architecture features during the compilation such as core group for massive parallelism, DMA for high bandwidth memory transfer and local device memory for data locality, in order to generate efficient code for deep learning application on Sunway. The experimental results show the ability of swTVM to automatically generate code for various deep neural network models on Sunway. The performance of automatically generated code for AlexNet and VGG-19 by swTVM achieves 6.71x and 2.45x speedup on average than hand-optimized OpenACC implementations on convolution and fully connected layers respectively. This work is the first attempt from the compiler perspective to bridge the gap of deep learning and high performance architecture particularly with productivity and efficiency in mind. We would like to open source the implementation so that more people can embrace the power of deep learning compiler and Sunway many-core processor

LogGPT: Exploring ChatGPT for Log-Based Anomaly Detection

The increasing volume of log data produced by software-intensive systems makes it impractical to analyze them manually. Many deep learning-based methods have been proposed for log-based anomaly detection. These methods face several challenges such as high-dimensional and noisy log data, class imbalance, generalization, and model interpretability. Recently, ChatGPT has shown promising results in various domains. However, there is still a lack of study on the application of ChatGPT for log-based anomaly detection. In this work, we proposed LogGPT, a log-based anomaly detection framework based on ChatGPT. By leveraging the ChatGPT's language interpretation capabilities, LogGPT aims to explore the transferability of knowledge from large-scale corpora to log-based anomaly detection. We conduct experiments to evaluate the performance of LogGPT and compare it with three deep learning-based methods on BGL and Spirit datasets. LogGPT shows promising results and has good interpretability. This study provides preliminary insights into prompt-based models, such as ChatGPT, for the log-based anomaly detection task

Exploring the Comprehension of ChatGPT in Traditional Chinese Medicine Knowledge

No previous work has studied the performance of Large Language Models (LLMs) in the context of Traditional Chinese Medicine (TCM), an essential and distinct branch of medical knowledge with a rich history. To bridge this gap, we present a TCM question dataset named TCM-QA, which comprises three question types: single choice, multiple choice, and true or false, to examine the LLM's capacity for knowledge recall and comprehensive reasoning within the TCM domain. In our study, we evaluate two settings of the LLM, zero-shot and few-shot settings, while concurrently discussing the differences between English and Chinese prompts. Our results indicate that ChatGPT performs best in true or false questions, achieving the highest precision of 0.688 while scoring the lowest precision is 0.241 in multiple-choice questions. Furthermore, we observed that Chinese prompts outperformed English prompts in our evaluations. Additionally, we assess the quality of explanations generated by ChatGPT and their potential contribution to TCM knowledge comprehension. This paper offers valuable insights into the applicability of LLMs in specialized domains and paves the way for future research in leveraging these powerful models to advance TCM

Intelligent-Unrolling: Exploiting Regular Patterns in Irregular Applications

Modern optimizing compilers are able to exploit memory access or computation patterns to generate vectorization codes. However, such patterns in irregular applications are unknown until runtime due to the input dependence. Thus, either compiler's static optimization or profile-guided optimization based on specific inputs cannot predict the patterns for any common input, which leads to suboptimal code generation. To address this challenge, we develop Intelligent-Unroll, a framework to automatically optimize irregular applications with vectorization. Intelligent-Unroll allows the users to depict the computation task using \textit{code seed} with the memory access and computation patterns represented in \textit{feature table} and \textit{information-code tree}, and generates highly efficient codes. Furthermore, Intelligent-Unroll employs several novel optimization techniques to optimize reduction operations and gather/scatter instructions. We evaluate Intelligent-Unroll with sparse matrix-vector multiplication (SpMV) and graph applications. Experimental results show that Intelligent-Unroll is able to generate more efficient vectorization codes compared to the state-of-the-art implementations

Observation of spin-orbit magnetoresistance in metallic thin films on magnetic insulators

A magnetoresistance effect induced by the Rashba spin-orbit interaction was predicted, but not yet observed, in bilayers consisting of normal metal and ferromagnetic insulator. Here, we present an experimental observation of this new type of spin-orbit magnetoresistance (SOMR) effect in a bilayer structure Cu[Pt]/Y3Fe5O12 (YIG), where the Cu/YIG interface is decorated with nanosize Pt islands. This new MR is apparently not caused by the bulk spin-orbit interaction because of the negligible spin-orbit interaction in Cu and the discontinuity of the Pt islands. This SOMR disappears when the Pt islands are absent or located away from the Cu/YIG interface, therefore we can unambiguously ascribe it to the Rashba spin-orbit interaction at the interface enhanced by the Pt decoration. The numerical Boltzmann simulations are consistent with the experimental SOMR results in the angular dependence of magnetic field and the Cu thickness dependence. Our finding demonstrates the realization of the spin manipulation by interface engineering.Comment: 12 pages, 4 figures, 14 pages in supplementary. To appear on Science Advance

DPHL: A DIA Pan-human Protein Mass Spectrometry Library for Robust Biomarker Discovery

To address the increasing need for detecting and validating protein biomarkers in clinical specimens, mass spectrometry (MS)-based targeted proteomic techniques, including the selected reaction monitoring (SRM), parallel reaction monitoring (PRM), and massively parallel data-independent acquisition (DIA), have been developed. For optimal performance, they require the fragment ion spectra of targeted peptides as prior knowledge. In this report, we describe a MS pipeline and spectral resource to support targeted proteomics studies for human tissue samples. To build the spectral resource, we integrated common open-source MS computational tools to assemble a freely accessible computational workflow based on Docker. We then applied the workflow to generate DPHL, a comprehensive DIA pan-human library, from 1096 data-dependent acquisition (DDA) MS raw files for 16 types of cancer samples. This extensive spectral resource was then applied to a proteomic study of 17 prostate cancer (PCa) patients. Thereafter, PRM validation was applied to a larger study of 57 PCa patients and the differential expression of three proteins in prostate tumor was validated. As a second application, the DPHL spectral resource was applied to a study consisting of plasma samples from 19 diffuse large B cell lymphoma (DLBCL) patients and 18 healthy control subjects. Differentially expressed proteins between DLBCL patients and healthy control subjects were detected by DIA-MS and confirmed by PRM. These data demonstrate that the DPHL supports DIA and PRM MS pipelines for robust protein biomarker discovery. DPHL is freely accessible at https://www.iprox.org/page/project.html?id=IPX0001400000